| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3644 |
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| Symbol | |
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| ID | 6117978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4437884 |
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| End bp | 4439302 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635195 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001762001 |
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| Protein GI | 170727975 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0893526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTCCAG TCGCTAGCTC ACCGCTTTCC CAAATAAAAG AAGCGCTCTC CATCTATAGC
CATAAAAGGG TACTGGTTTT ACTCCTACTA GGTTTCTCAG CCGGCTTACC TTTAATGCTA
GTATTCTCAA CCCTCTCTTT TTGGTTACGA GAAGCTGGTA TTGATAGAAC CGCAATTGGT
TACTTTAGCT GGATTGCACT CGCCTACGGT TTCAAGTGGG CCTGGTCCCC CTTAGTCGAC
AGACTCTCGC TGCCTATCTT CACCCGGCTA TTAGGTCGCC GACGAGGTTG GATGCTGTTT
GCACAGATAC TGTTAGTCAC TGCAATCTTA GGCATGTCAT TTAGCGACCC CGTTAAGGAC
TTGGAGCGCC TCGCTCTCTT CGCCTTAATG GTGGCTTTCG CCTCAGCAAC TCAAGATATT
GTGATTGATG CCTTTCGTAT CGAATCTGCA CCAGAGAAGA TGCAAGCCGC ACTTGCTGCG
GCCTATCAAG TTGGCTATCG CAGCGCCATG ATTGTCGCGA CAGCAGGTGC GCTCACCATT
GCCGCTTGGG TAGAGCCAAG CAGTGATGCC TATAGTCTGT TGTCATGGCA AACCGCTTAC
TTAATCATGG CAGGACTCAT GTCTGTGGGG ATTCTCACCA CGCTAATGAG TAAAGAGCCA
CAAGTTGAAA CTAAGCTTGC CGATGAGAAA GAGTTGGCGA TTAAGAGTGA GTTTAATCAG
CGCTATCCTA AAGCCATTGC AGGAACCCTA TCTTGGTTTT ACACCGCAAG CGTGCTGCCC
TTTATAGATT TTTTTAAACG TTATGGACAT AACGCCATTC TCATTTTGCT GCTTATCTCC
TGTTACCGGA TCTCAGACAT AGTGATGGGG ATTATGGCCA ATGTTTTCTA TGTAGATATG
GGATTTGCTA AAGATGAGAT AGCTGCGATA AGTAAAGTCT ACGGTCTCAT TATGACCTTA
GTCGGAGCGG GATTTGGTGG GGTACTACTC GCCCGTTATG GCACCATGAA GGTTCTATTT
CTAGGTGCGC TGCTTGTGGC CGTGACGAAT TTACTCTTCG CTTATCAGGC CATGATTGGC
TATAACGTGC CGTTTTTAAC CTTAGCCATC TCAGTCGATA ACTTCAGTGC AGGTATCGCA
ACCGCCGCCT TTATTGCATA TCTATCAAGC CTAACCAGTA CCGGATACAG TGCGACTCAA
TATGCTCTGC TCTCCTCAAT TATGTTGCTT TTCCCTAAGT TTATCGCAGG CTTCTCCGGT
GCCTATGTCG ATACTTTTGG CTATATCAAC TTCTTTATCG CCGCCAGCAT CATAGGTCTT
CCAGTACTTT GGTTAGTGCA TATCGTCGAT AAGCGAACGA AACATGACAG TGGCATGGTT
GAGCAAACAG ATAAACAAGT TTACGAGCAG GAGCGATAA
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| Protein sequence | MPPVASSPLS QIKEALSIYS HKRVLVLLLL GFSAGLPLML VFSTLSFWLR EAGIDRTAIG
YFSWIALAYG FKWAWSPLVD RLSLPIFTRL LGRRRGWMLF AQILLVTAIL GMSFSDPVKD
LERLALFALM VAFASATQDI VIDAFRIESA PEKMQAALAA AYQVGYRSAM IVATAGALTI
AAWVEPSSDA YSLLSWQTAY LIMAGLMSVG ILTTLMSKEP QVETKLADEK ELAIKSEFNQ
RYPKAIAGTL SWFYTASVLP FIDFFKRYGH NAILILLLIS CYRISDIVMG IMANVFYVDM
GFAKDEIAAI SKVYGLIMTL VGAGFGGVLL ARYGTMKVLF LGALLVAVTN LLFAYQAMIG
YNVPFLTLAI SVDNFSAGIA TAAFIAYLSS LTSTGYSATQ YALLSSIMLL FPKFIAGFSG
AYVDTFGYIN FFIAASIIGL PVLWLVHIVD KRTKHDSGMV EQTDKQVYEQ ER
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