| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3621 |
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| Symbol | |
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| ID | 6117955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4416639 |
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| End bp | 4417160 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635174 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001761980 |
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| Protein GI | 170727954 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.767464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAG TAGAGAAGTT AACTGAATTT ATCGGTAAGG GGGTAAGCTG GTTTACACTC
TTTATTGTAT TGATGACCTT AGCAGTTGTT GTGCTTCGTT ATGCCTTTAG TACAGGTGCA
ACGGCAATCC AAGAGGGCGC GTTATATCTT CATGGCGCGG TATTAACCTT GGCGGCAGGG
TATACTCTTA AACATGATGG ACATGTTCGG GTCGATATCT TTTATCGGCA CTTCTCCTCC
CGTGGTCAGC ATTGGGTTGA TCTGCTCGGC ACTCTTTTTC TACTTTTCCC TGTTTGTATC
TTTATCACAT ACTCCTGCTT TGATTATGTT TTAGCTTCTT GGCGTTACGC TGAAACCTCG
GTTGAAGCGG GTGGTTTGGA ATATGTCTAT CTTCAGAAAA GCCTGCTTTT ATTACTAGTA
GTGAGCCTGT TGCTTCAAGG TTGTGTCGAA CTCGTGCGTC ACGCATCGGC TTTGTTTGCC
AACAAGAGAG AAGAGAGTGA AGAGACGGGA GAGCAGGGTT AA
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| Protein sequence | MNRVEKLTEF IGKGVSWFTL FIVLMTLAVV VLRYAFSTGA TAIQEGALYL HGAVLTLAAG
YTLKHDGHVR VDIFYRHFSS RGQHWVDLLG TLFLLFPVCI FITYSCFDYV LASWRYAETS
VEAGGLEYVY LQKSLLLLLV VSLLLQGCVE LVRHASALFA NKREESEETG EQG
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