| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3582 |
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| Symbol | |
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| ID | 6117916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4374061 |
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| End bp | 4375197 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635135 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001761941 |
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| Protein GI | 170727915 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000132577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.338905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGC GAGATTATTA CGAAGTACTA AGTGTTGGAC GTGATGCCAG CGAACGTGAA
ATTAAAAAGG CTTACAAGCG TTTAGCCATG AAGTTTCACC CGGATCGCAA TCCAGGAGAT
AAAGCTGCTG AAACCAGCTT TAAAGAGGTT AAAGAAGCCT ACGAAATCCT GACTGATAGC
GATAAAAAAG CCGCCTATGA CCAGTTTGGT CATGCAGGTG TTGATCCAAA TCGCGGTGGC
GGTGGATTCG GTGGTAATGC CGATTTCGGC GATGTATTCG GCGATGTGTT CGGCGATATC
TTCGGCGGTG GACGTCGTGG TGGCGGTCAA CGTCAAGCAG CACGTGGTAG CGACCTGCGT
TACAACCTTG AACTCTCTCT TGAAGAGGCT GTTAAAGGTT TGACTAAAGA GCTACGCATT
CCAACTTTGG CTCATTGTGA TACTTGTGAT GGCAGCGGCG CTAAGAAAGG CACATCGCCT
ACCACTTGTG GTACCTGTCA TGGTCAAGGC CAAGTGCAGA TGCGTCAGGG ATTCTTTGCG
GTTCAGCAAG CCTGTCCGAC CTGTCATGGT CGCGGTAAGA TCATTAAAGA CCCATGTAAT
TCATGTCATG GCGAAGGTCG TGTTGAGAAG AGCAAGACAC TTTCAGTTAA GATCCCTGCT
GGGGTTGATA ATGGCGATCG TATTCGTCTA TCTGGCGAAG GTGAAGCGGG CGAGTTTGGT
GCACCTCCAG GTGATCTGTA CGTTCAGGTT AGTGTGCGTG AGCATGCTAT CTTTGTTCGT
GATGGCAATA ACCTTTACTG CGAAGTGCCA ATCTCATTTG GTAAAGCAGC CCTAGGTGGT
GAGATAGAGG TTCCTACTTT AGACGGTAAG GTTAATCTTA AGATCCCTGC TGAGACGCAA
ACGGGTCGTA TGTTCCGTAT GCGCGGTAAA GGTGTTAAGT CTGTTCGCAG TCATGCGGTT
GGCGATCTAC TTTGTAAAGT TGTGATGGAG ACGCCTGTTA AACTTAACGA ACGTCAAAAA
GAGCTACTTC GCGAATTTGA TGAAACCTTA GCGGGTTCAT CGTCTAAGAA ACATAGCCCT
AAAGCTGAAG GTTTCTTTGA TGGTGTGAAG AAGTTTTTTC AAGACTTAAA TAGCTAA
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| Protein sequence | MSKRDYYEVL SVGRDASERE IKKAYKRLAM KFHPDRNPGD KAAETSFKEV KEAYEILTDS
DKKAAYDQFG HAGVDPNRGG GGFGGNADFG DVFGDVFGDI FGGGRRGGGQ RQAARGSDLR
YNLELSLEEA VKGLTKELRI PTLAHCDTCD GSGAKKGTSP TTCGTCHGQG QVQMRQGFFA
VQQACPTCHG RGKIIKDPCN SCHGEGRVEK SKTLSVKIPA GVDNGDRIRL SGEGEAGEFG
APPGDLYVQV SVREHAIFVR DGNNLYCEVP ISFGKAALGG EIEVPTLDGK VNLKIPAETQ
TGRMFRMRGK GVKSVRSHAV GDLLCKVVME TPVKLNERQK ELLREFDETL AGSSSKKHSP
KAEGFFDGVK KFFQDLNS
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