Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3580 |
Symbol | |
ID | 6117914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4372245 |
End bp | 4372862 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635133 |
Product | peptidylprolyl isomerase FKBP-type |
Protein accession | YP_001761939 |
Protein GI | 170727913 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000105609 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.200904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACA AGTTTACTAC TATTGAAGCG CAAGCAAGTT ATGGCGTTGG TCGCCAGCTT GGTGAGCAGC TAGCTGCTAA CTCTTTCGAA GGTATCGATA TCTCAGCTGT ACAGCTAGGT CTATCTGATG CATTTGACGG TAAAGAGAGT CAAGTTGCTA TGCAAGATCT TCAGGTTGCA TTTACTGAGA TCAGCCAGCG CATTCAAAAG GTACAGGAAG CTGCCGCTGA AGCTGCCTCA GCTGAAGGTG AAACATTCCT TGCTGACAAT GCTAAGCGTG ATGGCGTTCA GACATTAGAG TCTGGCTTAC AGTATGAGAT CATCACCGAA GGTACTGGTG ATAAGCCAAG CCTAGATGCG ACTGTTCGTA CTCACTACCA CGGTACTTTC ATCAGTGGCG ATGTGTTCGA TAGCTCTGTT GTTCGTGATC AGCCTGCTGA ATTCCCAGTA TCGGGTGTTA TTGCTGGTTG GACTGAAGCA CTTCAGCTAA TGCCAGTTGG TTCTAAGTGG AAGTTATATG TTCCACATCA CCTAGCGTAC GGCGAGCGTG GAGCAGGTGC TTCAATCCCG CCATACTCGG CACTCGTATT TGAAGTCGAG TTACTCGATA TTCTGTAA
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Protein sequence | MSDKFTTIEA QASYGVGRQL GEQLAANSFE GIDISAVQLG LSDAFDGKES QVAMQDLQVA FTEISQRIQK VQEAAAEAAS AEGETFLADN AKRDGVQTLE SGLQYEIITE GTGDKPSLDA TVRTHYHGTF ISGDVFDSSV VRDQPAEFPV SGVIAGWTEA LQLMPVGSKW KLYVPHHLAY GERGAGASIP PYSALVFEVE LLDIL
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