Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3579 |
Symbol | |
ID | 6117913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4371337 |
End bp | 4372152 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641635132 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_001761938 |
Protein GI | 170727912 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0145714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.121498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGTG AAAAAGTAAG AGTCGCAATT ACTGGTGGCA GTGGTCGCAT GGGTAGAACT CTTATTGAAG CCGCAAGGCA GCAACCTATG ATCTATTTGG GTGCCGTTAT TGAGCGAGCT GGCTCCACCT TAATTGGTGT CGATGCTGGT GAACTTGCCG GTGTCGGTTC GATGAATGTA CCTATTACTG ATTCATTAGA TCTTGCGGTT GATGATTTCG ATGTCCTAAT TGACTTTACC TCTCCAGAGG CGAGCTTGGT GCATACAGAT TGGTGTGCCA AACATGGTAA AGCGATTGTT ATCGGAACAA CTGGTTTTAA TCACTCTCAA AAAGAACAGA TCTCAGCGTA TGCTGAAAAG ACACCTGTGG TGATGGCTCC TAATATGGCG GTCGGCGTTA ATCTACTGTG GAAACTGCTT GAGGTTGCAG CAGAGGTGAT GGGAGATTAC ACCGACATTG AGATTATCGA AGGTCATCAT AGATATAAGA AAGACGCCCC ATCGGGCACA GCGCTTAAGA TGGGAGAGGT GATTGCCGAA ACCTTAGGCC GCGACCTTGA TAAGTGCGCA GTTTATGGTC GTGAGGGGAT AACCGGTGAG CGTGATCGTC AAACCATAGG TTTCTCAACC ATACGTGCTG GTGACATCGT GGGTGAGCAC ACAGCCCTGT TCGCCGATAT TGGTGAGCGA ATTGAGATCA CCCATAAAGC TTCAAGCAGG ATGACCTTTG CCAATGGAGC AATGAGAGCT GCTTCCTGGC TGGTTGAGCA AGATGCTGGT CTTTACGATA TGCAGCAAGT CTTAGGACTG AAGTAG
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Protein sequence | MMSEKVRVAI TGGSGRMGRT LIEAARQQPM IYLGAVIERA GSTLIGVDAG ELAGVGSMNV PITDSLDLAV DDFDVLIDFT SPEASLVHTD WCAKHGKAIV IGTTGFNHSQ KEQISAYAEK TPVVMAPNMA VGVNLLWKLL EVAAEVMGDY TDIEIIEGHH RYKKDAPSGT ALKMGEVIAE TLGRDLDKCA VYGREGITGE RDRQTIGFST IRAGDIVGEH TALFADIGER IEITHKASSR MTFANGAMRA ASWLVEQDAG LYDMQQVLGL K
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