| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3569 |
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| Symbol | rrmJ |
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| ID | 6117903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4358040 |
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| End bp | 4358669 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635122 |
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| Product | 23S rRNA methyltransferase J |
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| Protein accession | YP_001761928 |
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| Protein GI | 170727902 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000518365 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00046637 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGGAA AAAAACGAAC AGCAAGTTCC TCCCGTTGGA TGCAGGAACA TTTTGATGAT
CACTATGTCA AATTGGCTCA AAAACGGGGA TTTCGTTCAC GCGCAGCGTT TAAAATAGAG
GAGATCCAGG AGAAAGATAA ACTGATCCGT CCTGGAATGA CTGTTGTTGA TTTAGGTGCC
GCACCTGGTG GTTGGTCTCA GGTTGCAGTT AAATTAGCGG GTGACAATGG TAAAGTTATC
GCTTGTGATA TTTTGCCGAT GGATCCCATT GTTGGTGTTG ATTTTCTTCA AGGAGATTTT
AGGGAGGAGA AAGTTCTCGA TGCATTGTTA ACTCGTGTAG GTGATGCCAA AGTCGATGTT
GTTTTATCTG ATATGGCGCC TAATATGAGT GGTACAGGTG GTGTAGATCA ACCTCGCGCT
ATGTATCTAG TTGAGTTAGC ATTAGATATG TGTCATCAAG TGTTGGCACC AAATGGTTGC
TTTGCTGTTA AAGTCTTTCA GGGGGAGGGC TTTGAAGAGT ACATGAAATC AGTAAGAGAG
GCGTTTAAAA CCGTCAAAAC ACGTAAGCCA GACTCTTCGC GACCACGTTC GCGTGAAGTC
TATCTTGTGG CGACAGGGTA CAAGTTATAG
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| Protein sequence | MSGKKRTASS SRWMQEHFDD HYVKLAQKRG FRSRAAFKIE EIQEKDKLIR PGMTVVDLGA
APGGWSQVAV KLAGDNGKVI ACDILPMDPI VGVDFLQGDF REEKVLDALL TRVGDAKVDV
VLSDMAPNMS GTGGVDQPRA MYLVELALDM CHQVLAPNGC FAVKVFQGEG FEEYMKSVRE
AFKTVKTRKP DSSRPRSREV YLVATGYKL
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