| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3568 |
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| Symbol | |
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| ID | 6117902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4355837 |
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| End bp | 4357810 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635121 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001761927 |
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| Protein GI | 170727901 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000520805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000681699 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGTGATA TGGCAAAAAA TTTAATTCTC TGGGTTGTCA TCGCCGTGGT GTTGATGTCT
GTATTTCAGG GTTATTCCCC CTCTTCTTCC AGCGCGTCGA AGATGGATTA TTCCGCTTTT
TTAGATGATG TTCGTAGTGG ACAGATTAAT ACCGTCGAAA TAAAAAGCGA TCAGCGTACG
ATTGAGGGTA CTAAGCGCAC CGGGGAGAAA TTCACGACGA TTATGCCTCT GTTTGATAAA
GATCTGATTA ATGATCTTGA TCGAAAAGGG ATCGTGATGA AGGGGCAGGA AGCTGAAGAG
TCAGGGTTTT TAACCCAGAT CTTTATCTCT TGGTTCCCTA TGCTATTGCT CATCGGTGTG
TGGATATTCT TCATGCGTCA GATGCAAGGT GGCGGCGGTA AAGGCGCGAT GTCATTTGGT
AAAAGTAAAG CCAAATTGAT GAGCGAAGAT CAGATCAAGA CGACTTTTGG TGATGTTGCT
GGTTGCGATG AAGCTAAAGA GGACGTTAAG GAGCTGGTTG ATTACCTTAA AGAGCCAACT
AAATTCCAAA AGCTAGGCGG TCGTATTCCT ACTGGTGTTC TGCTTGTTGG TCCTCCAGGT
ACAGGTAAGA CTTTGCTAGC AAAAGCGATT GCTGGTGAAG CTAAAGTACC TTTCTTTACA
ATTTCAGGTT CTGACTTTGT TGAGATGTTT GTTGGTGTCG GTGCATCTCG TGTGCGTGAC
ATGTTCGAGC AAGCTAAGAA ATCTGCACCT TGTATCATCT TTATCGATGA GATCGATGCC
GTAGGTCGCC AACGTGGCGC AGGTGTTGGT GGTGGACACG ATGAACGTGA ACAGACACTG
AACCAGATGC TGGTTGAGAT GGATGGTTTC GAAGGTAATG AAGGCGTGAT TGTTATTGCC
GCAACCAACC GTCCAGATGT ACTGGATGCT GCACTGCTTC GTCCTGGTCG TTTTGACCGT
CAAGTGGTGG TTGGTCTGCC AGATGTTCGT GGTCGTGAGC AGATCTTAAA GGTACATATG
CGCAAAGTGC CTTTAGCTGA TGATGTTAAA GCGAGCGTTA TTGCACGTGG TACTCCTGGA
TTCTCTGGGG CTGACTTGGC TAACTTAGTC AATGAAGCGG CACTGTTTGC AGCTCGTGGA
AACCGACGTA TTGTTGGTAT GGAAGAGTTC GAAAGTGCCA AAGACAAGAT CATGATGGGG
GCTGAACGCC GCACTATGGT GATGTCTGAG GAGGAGAAAG AGATGACCGC TTACCATGAA
GCGGGACATG CTATTGTAGG TTGCTTAGTA CCTGAGCACG ACCCGGTGCA TAAGGTAACA
ATTATTCCAC GTGGCCGTGC ATTAGGTGTG ACTTTCTTCC TGCCTGAAGC GGATGCTATT
AGTCAAAGTC GTCGTAAGCT AGAGAGCCAA ATCTCAGTAG CTTATGGTGG AAGACTCGCG
GAAGAGATTA TTTATGGCAG TGAGCGAGTA TCAACTGGTG CTTCTCAAGA CATTAAATAT
GCAACGTCGA TAGCACGTAA CATGGTGACC CAATGGGGCT TCTCTGAAAA GTTAGGTCCA
GTACTTTACG CCGAAGATGA AAACGAAGTC TTCCTAGGGC GTAGTATGGG CAAGTCACAA
CATATGTCAG ATGAGACTGC GAGTATTATT GATCTTGAGG TTAAAACGCT TATCGATAAT
AACTATCAAC GTGCTCAGAC ATTCTTGAAT GACAACATGG ACATTCTTCA TGCAATGAAA
GATGCGTTGA TGAAGTATGA AACTATCGAT GCTAATCAGA TTGATGATCT GATGGAGCGT
AGAGAGGTTC GTGACCCTGT TGATTGGAAC ATGGATGATA ATGGTTCAAG CAATGATAAA
GGTGGCAAGT CTGCTAAATC AGATGACACT CCTGTTCAAG AAGAAGCGAA AGCTGAACCT
GAACAAGCTA ATGCACCTGA CGTTAATGAA GCTGATGAAT CAACAGCTAA GTAA
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| Protein sequence | MSDMAKNLIL WVVIAVVLMS VFQGYSPSSS SASKMDYSAF LDDVRSGQIN TVEIKSDQRT
IEGTKRTGEK FTTIMPLFDK DLINDLDRKG IVMKGQEAEE SGFLTQIFIS WFPMLLLIGV
WIFFMRQMQG GGGKGAMSFG KSKAKLMSED QIKTTFGDVA GCDEAKEDVK ELVDYLKEPT
KFQKLGGRIP TGVLLVGPPG TGKTLLAKAI AGEAKVPFFT ISGSDFVEMF VGVGASRVRD
MFEQAKKSAP CIIFIDEIDA VGRQRGAGVG GGHDEREQTL NQMLVEMDGF EGNEGVIVIA
ATNRPDVLDA ALLRPGRFDR QVVVGLPDVR GREQILKVHM RKVPLADDVK ASVIARGTPG
FSGADLANLV NEAALFAARG NRRIVGMEEF ESAKDKIMMG AERRTMVMSE EEKEMTAYHE
AGHAIVGCLV PEHDPVHKVT IIPRGRALGV TFFLPEADAI SQSRRKLESQ ISVAYGGRLA
EEIIYGSERV STGASQDIKY ATSIARNMVT QWGFSEKLGP VLYAEDENEV FLGRSMGKSQ
HMSDETASII DLEVKTLIDN NYQRAQTFLN DNMDILHAMK DALMKYETID ANQIDDLMER
REVRDPVDWN MDDNGSSNDK GGKSAKSDDT PVQEEAKAEP EQANAPDVNE ADESTAK
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