| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3566 |
|---|
| Symbol | glmM |
|---|
| ID | 6117900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4353438 |
|---|
| End bp | 4354775 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641635119 |
|---|
| Product | phosphoglucosamine mutase |
|---|
| Protein accession | YP_001761925 |
|---|
| Protein GI | 170727899 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | [TIGR01455] phosphoglucosamine mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0054919 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000589779 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGA GAAAGTTTTT TGGAACAGAT GGTATCCGCG GTAAAGTTGG CGCGGGTAAA
ATGACACCTG AGTTGGCGTT AAAGCTTGGC TGGGCGGCGG GAAGGGTACT TTCGCGTTCT
GGCACTCAAA AAGTGATCAT CGGTAAAGAT ACCCGTATTT CTGGTTACCT TTTTGAGTCG
GCAATGGAAG CTGGGTTATC GGCAGCTGGC CTCAACGTTA TGTTGATGGG ACCTATGCCA
ACACCTGCTG TGGCGTATTT GACTAGAACC TTTAGGGCTG AAGCGGGCGT TGTGATCAGT
GCATCTCACA ACCCTTATTA TGATAACGGG ATTAAATTCT TCTCCACCGA TGGCAGTAAA
CTTGATGATG AAGTCGAGCT TGAGATTGAA CGTGAGCTTG AAAAACCGCT GACCTGTGTT
GAATCACACC TTTTAGGCAA GGTGTCTCGT ATTGACGATG CTCCTGGTCG TTACATTGAG
TATTGTAAAG GTAACTTCCC TGCGGAGCAT ACGCTACGCG GACTGAAAAT CGTCGTCGAT
TGTGCCCATG GCGCCACTTA TCATATCGCA CCTAATGTCT TTCGTGAGCT AGGAGCGGAT
GTAATCGCTA TCGGTGATAA ACCTGATGGA CTAAACATCA ACCATGAAGT CGGCGCGACC
TCTATGGCTA AGATTTGCGA AACCGTTGTT GCGGAAAAGG CTGATTTGGG TATTGCGCTT
GATGGCGATG GTGACCGTAT CATGATGGTT AACCGTGAAG GTCGAGTCAT CGATGGTGAT
GAGATCCTCT ATATACTGGC TTGTGATGCC CAGCTTCGCG GTGTACTTTG CGGCGGTGTG
GTTGGGACCT TGATGTCTAA CCTAGGTCTT GACCTTGCGC TGCAGGAGCT CGATATTCCT
TTTGCTCGCT CCAACGTAGG CGATCGTTAC GTGATGACGA TGCTGAAAGA GAAAGGCTGG
CGTATTGGTG GTGAAAACTC AGGTCATATC CTCAACTTAG ATCATGGTAC TACAGGCGAT
GGTATTGTAG CTGGCATTTT GGTGCTTGCT GCTATGTGTC GTCAAAATGC AACCCTTGAT
GAGTTGACGG CTAATATCAA GATGCTACCA CAAGTACTCG TTAACGTTCG TTTCGAGGGT
GACCATGATC CTTTAGCCTC AAAAGAGGTG CTAAATGCAC AAAAAGAGGT TGAGTCACAA
TTGGGTGAGC GTGGCCGAGT CTTATTAAGA AAATCGGGTA CAGAACCATT GATCCGTGTG
ATGGTTGAAG GTGATGTCGA AGCCGATGTC ATTAAGCATG CTAACTATAT TGCCGATGCG
GTGAGAAACT TAGTTTAA
|
|---|
| Protein sequence | MSMRKFFGTD GIRGKVGAGK MTPELALKLG WAAGRVLSRS GTQKVIIGKD TRISGYLFES
AMEAGLSAAG LNVMLMGPMP TPAVAYLTRT FRAEAGVVIS ASHNPYYDNG IKFFSTDGSK
LDDEVELEIE RELEKPLTCV ESHLLGKVSR IDDAPGRYIE YCKGNFPAEH TLRGLKIVVD
CAHGATYHIA PNVFRELGAD VIAIGDKPDG LNINHEVGAT SMAKICETVV AEKADLGIAL
DGDGDRIMMV NREGRVIDGD EILYILACDA QLRGVLCGGV VGTLMSNLGL DLALQELDIP
FARSNVGDRY VMTMLKEKGW RIGGENSGHI LNLDHGTTGD GIVAGILVLA AMCRQNATLD
ELTANIKMLP QVLVNVRFEG DHDPLASKEV LNAQKEVESQ LGERGRVLLR KSGTEPLIRV
MVEGDVEADV IKHANYIADA VRNLV
|
|---|
| |