Gene Swoo_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3563 
Symbol 
ID6117895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4351105 
End bp4351560 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID641635114 
Producthypothetical protein 
Protein accessionYP_001761922 
Protein GI170727896 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.380474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000509959 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCAACTA TAGAAAATAG ACTGGAAGAG ATGCTTAAAT CTCCAGTTGA GGCACTAGGC 
CACACACTTT GGGGATTAGA GTATATCCAG GCGGGTAAAC ACTCTGTCGT AAGAGTTTAT
ATCGATAATG AGAAAGGCGT CTTCATCGAA GATTGTGCCG AAGTAAGCCG CCAGGTCAGT
GCTGTGCTAG ATGTTGAAGA TCCCATCTCA ACCGAATACA CATTAGAAGT TTCCTCTCCC
GGTGTAGATA GGCCACTTTT TAATGCCGAG CAATATACTG CTTACATCGA TGAGACTGTA
AAGATTCAAC TGACTATGCC TGTTGCTGGT AGTCGTAATT TAAAGGGGAC CGTTACAGGA
GTTGAAGGGC AGATGCTCAC ACTTACTGTT GATGGTAACG AACTGATTAT TGCTTTGGAT
AATATCCGTA AAGGCAACCT AATCGCTAAG TTTTGA
 
Protein sequence
MATIENRLEE MLKSPVEALG HTLWGLEYIQ AGKHSVVRVY IDNEKGVFIE DCAEVSRQVS 
AVLDVEDPIS TEYTLEVSSP GVDRPLFNAE QYTAYIDETV KIQLTMPVAG SRNLKGTVTG
VEGQMLTLTV DGNELIIALD NIRKGNLIAK F