| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3547 |
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| Symbol | |
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| ID | 6117879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4329500 |
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| End bp | 4330717 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635098 |
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| Product | phosphopentomutase |
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| Protein accession | YP_001761906 |
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| Protein GI | 170727880 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0922116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000231976 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGAA CAATCATAAT GATGTTGGAC TCATTTGGCG TAGGAGCAGC AACTGATGCT
GAATCTTTCG GTGATGTGGG TTCAGATACG TTTGGTAGTA TAGCCAAAGC GTGCGCCGAA
GGAAGAGCCG ACATAGGCCG CGAAGGCCCG CTTAAACTGC CAAACCTTTC TAAACTCGGT
TTAGCATTGG CGGCGAAAGA GAGTACTGGT ACTTTTGCTC CAGGCTTTAG CGATGATGTT
GAGGTGATTG GTGCCTATGG TCACGCAGAT GAGTTAAGTA CTGGTAAAGA TACGCCAAGT
GGTCACTGGG AGATGGCGGG TGTGCCAGTT CTCTATGAGT GGGGCTACTT TAGCGATCTG
ACTAACTCTT TTCCAAAAGA ACTTACTGAC AAAATCTTAG CTAGAGCAGG TCTTGATGGC
TACTTAGGTA ATTGCCATGC TTCTGGAACC GCCATTCTAG AAGAGTTAGG TGAAGAGCAT
ATGCGCACTG GTAAGCCTAT CTTCTATACC TCTGCCGACT CTGTTTTTCA AATAGCATGT
CATGAAGAGA GTTTTGGGTT AGAAAACCTT TACAACTTAT GTATCATCGC TCGTGAAGAG
CTTGAACCCT ATAATATAGG TCGTGTTATC GCTCGAGCTT TCGTAGGCAC AGGTCCAAGT
GATTTTGCCC GTACAGGTAA TCGTCGTGAC TACGCGGTTG AGCCACCTTC AAAAACGGTA
CTTGATAAGA TGAAAGCCGC CGGTGGTGAA GTGATTAGTG TCGGTAAAAT TGCGGATATC
TATGCCAATT GCGGTATCAC TCAAAAAGTG AAAGCGACGG GACTAGAAGC ACTGTTTGAT
GCAACACTTG AGCAGGTTAA AGCGGCAGGT GATAAGAGTA TCGTCTTCAC TAACTTTGTT
GATTTCGACT CCCATTACGG TCACCGTCGT GATATTGCAG GTTACGCGAA AGCCCTTGAG
TATTTTGACT CTCGTTTACC TGAAATATTT GAAATTTTAG GCGAAGATGA CTTGCTGTTA
CTGACAGCGG ATCACGGTTG TGATCCAAGT TGGAAAGGAA CAGATCATAC CCGTGAACGC
GTGCCTGTAT TGGCCTATGG TGCTGGATTA AAAGCGGGCT CTTTAGGACG CCGCAACAGC
TTTGCCGATA TTGGTCAATC GATTGCGAGC TACTTTAAGC TTGAGCCGAT GGAATACGGT
GAGTCTTTCA TTAAGTAA
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| Protein sequence | MKRTIIMMLD SFGVGAATDA ESFGDVGSDT FGSIAKACAE GRADIGREGP LKLPNLSKLG
LALAAKESTG TFAPGFSDDV EVIGAYGHAD ELSTGKDTPS GHWEMAGVPV LYEWGYFSDL
TNSFPKELTD KILARAGLDG YLGNCHASGT AILEELGEEH MRTGKPIFYT SADSVFQIAC
HEESFGLENL YNLCIIAREE LEPYNIGRVI ARAFVGTGPS DFARTGNRRD YAVEPPSKTV
LDKMKAAGGE VISVGKIADI YANCGITQKV KATGLEALFD ATLEQVKAAG DKSIVFTNFV
DFDSHYGHRR DIAGYAKALE YFDSRLPEIF EILGEDDLLL LTADHGCDPS WKGTDHTRER
VPVLAYGAGL KAGSLGRRNS FADIGQSIAS YFKLEPMEYG ESFIK
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