Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3542 |
Symbol | |
ID | 6117874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4324352 |
End bp | 4325590 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635093 |
Product | putative esterase |
Protein accession | YP_001761901 |
Protein GI | 170727875 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0209702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTA TCCTCATAAC AATCGCAGTT ACTCTTGTAC TGCTCACCAG TTTAAACCTC AATGCCACCT CTTTAGATAA GACCCCAATA GTGAGTGCCT ATCAATACCA GCACCACTCA CAGATACTTG CACAGAAGAG GCGCTATATG GTCTCACTTC CCGAGCGGTA TCAAATCAAT CAAAGAGATT TCCCGACACT CTATATCATA GATGCGGACT TCCAGTTTCA ACATGTCTCA TCGATAGTGA AACATCTAAC TCGTATGGGA AAGTTACCGC CTATGATAGT CGTCGGTATC GCCAATCAGG GAGACGATGA CTACCTTAAA ACAACGACTT GGCCCGACGG TAAAGACGAT GCTTTTGGGG GAGCTGCTCA GTTCCACACT TACTTGAAAC AGGAGTTATT GCCAACTATT GACGCTCAAT TTCGAACCGA TGACCGCAAA GCACTCGCTG GTTACTCACT TGGCGGCCTA TTCACTCTCT ACAGCATGAT GCAAATGCAG ACTCCATTTA ATGCATTTTT AGCCATGAGT CCCAGTGCTT GGCATGACGG CAACAGCCTA CCAGGAAAAA TTGAATCTCT ACTCAAACAG GGGAAAATAA CCTCTCCGGT GTTTATCTCA TTGGCCAATG AAGAGGGGAT GGGAGTTGAA AAGTTAATTC AGGTATTTGA GCAAGCTGCG CCTGCAAAGC TAAATTGGCA ATATAAACAT TATCCTAACG AAAATCACTT CACCACCGCG CTGCCCGCCC TCTACGATGG ATTGCAATTT TTAGCACCAG ACTACGCCAT TGATGGCACA GACATGTTAG CCATAGGTGA CTATAAGCAA GTGTTAACTC ACTTTAGTCA GCAACAGGAA AATTGGGCAG GATTTCAGTT TGAGTGGCTG ACCGCCTATC AATTTGCCAA GTACCTATTT TGGTCAAAGC AGCTAGATGA GGTCGATAAC GTGCTAAAAG CGGTAAAGAC ACAGTTTCCT GAATCTTTCG CCAATGTGAG TATTCAACTA GCTAAAGGCT TTAATAAAAA ACAAGATTTT AAGCGTGTTG CTCAACTGCT CAACGGTGTG AAGGCTGAAG GAGAAACACT ACCTGGATGG CATAAGCAGA TGAGTATCTA TTATAAAAGT ACTGATAAAC CTGAATTGGC GAAACAACAT CAAGAGCAAG CATTGATGTT AGCAAAAAAG TATGACCTTG AAAGCTGGGA GGTGTGGGAG CTTAAATAA
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Protein sequence | MKSILITIAV TLVLLTSLNL NATSLDKTPI VSAYQYQHHS QILAQKRRYM VSLPERYQIN QRDFPTLYII DADFQFQHVS SIVKHLTRMG KLPPMIVVGI ANQGDDDYLK TTTWPDGKDD AFGGAAQFHT YLKQELLPTI DAQFRTDDRK ALAGYSLGGL FTLYSMMQMQ TPFNAFLAMS PSAWHDGNSL PGKIESLLKQ GKITSPVFIS LANEEGMGVE KLIQVFEQAA PAKLNWQYKH YPNENHFTTA LPALYDGLQF LAPDYAIDGT DMLAIGDYKQ VLTHFSQQQE NWAGFQFEWL TAYQFAKYLF WSKQLDEVDN VLKAVKTQFP ESFANVSIQL AKGFNKKQDF KRVAQLLNGV KAEGETLPGW HKQMSIYYKS TDKPELAKQH QEQALMLAKK YDLESWEVWE LK
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