Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3525 |
Symbol | |
ID | 6117857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4301880 |
End bp | 4303058 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635076 |
Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
Protein accession | YP_001761884 |
Protein GI | 170727858 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGA TCATCAACAT TTGGCGCACA CTTACCAAGC CTGCCAAATT TCTTACCTTA GGTTCGGTCA GTATATCTGC CTTCCTGATG GGTATTATCT TCTGGGGTGG ATTTAACACA GCCTTAGAGG CGACAAACAC CGAAGAGTTC TGTATTAGCT GCCACAGTAT GGAAAGCATG CCATACAAGG AGCTGCAGGA AACAGTACAT TGGTCTAATC ACTCAGGTGT TCGTGCAACC TGTCCTGATT GCCATGTTCC TCACAACTGG AGCCGTAAAA TTGCTCGTAA GATGGAAGCA TCTCACGACG TATGGGGCTG GATGTTACAA ACAGTCAATA CACCAGAAAA GTTTGAAGAG AAACGCTTAG AGATGGCGAG CCGCGAGTGG AAACGCTTCG ATCGTGACAA CTCTCTGGCT TGTAAAAACT GCCATAACTA CGACTCAATG AAGTGGGAAA GCATGTCTAA GCTGGCTCAA AAGCAGATGA AACGCGCTGC AGAGCTAGAT CAAAGCTGTA TCGATTGCCA CAAAGGGATC GCACATAAGC TACCAGATAT GGGAACATCA CGTGCGCCAG AGCTTATCGC TCAAGTTGGC TCAGGTGAGA GTGCTCCTCA GGTCGAGCAA ACTTATTTCT CAGCATTAAC TAAACCACTT TACTTCAACG AGAAAACAGA CGTTGAGGCA GGAACCCTAA ATATCGCCAC TAAAGTCAAG GTGTTAGAGA CTAAAGGCAA CCGCGTTAAA ATTGGTATCG ATGGCTGGCG CAAAAAGATT GGTGCAGGTC GTGTGATCTA CTTCGATTTC GGTCTTAACA TCCTATCGGC TCAACTAAGT AAAGATGCCG CCCTTGAAGA GGGTGTAATG GAAGTGTTCG AAGAGAAAGA AGATCCATTA ACAGGTCTTA AGTGGCAACG TGTTGAAGCT AAGATCTGGA CCGACAAAGA TTACTTGGTC ACCGATCTAC AGCCACTTTG GGACTATGCT CGTGAAACAT ACAGCACAAG CTGTAGTGTA TGTCACACCC AACCTGCCGA AGCACACTTC GATGCCAACA CTTGGCCAGG TATGTTCCAA GGCATGATCG CTTTCGTTAA CATGGATCAG GATACTCAAG CGCTGGTACA GAAATACCTA CAAGAGCATT CGTCTACTTT CGATAAGTCT GCGCACTAG
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Protein sequence | MKWIINIWRT LTKPAKFLTL GSVSISAFLM GIIFWGGFNT ALEATNTEEF CISCHSMESM PYKELQETVH WSNHSGVRAT CPDCHVPHNW SRKIARKMEA SHDVWGWMLQ TVNTPEKFEE KRLEMASREW KRFDRDNSLA CKNCHNYDSM KWESMSKLAQ KQMKRAAELD QSCIDCHKGI AHKLPDMGTS RAPELIAQVG SGESAPQVEQ TYFSALTKPL YFNEKTDVEA GTLNIATKVK VLETKGNRVK IGIDGWRKKI GAGRVIYFDF GLNILSAQLS KDAALEEGVM EVFEEKEDPL TGLKWQRVEA KIWTDKDYLV TDLQPLWDYA RETYSTSCSV CHTQPAEAHF DANTWPGMFQ GMIAFVNMDQ DTQALVQKYL QEHSSTFDKS AH
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