| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3482 |
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| Symbol | |
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| ID | 6117814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4257723 |
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| End bp | 4259072 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635035 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_001761843 |
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| Protein GI | 170727817 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.456655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0775956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCTG AGATCTCGAG TCAAGACTTA GCTTTGGTCA ATGACCCTAT CCCTAAACTG
CTATGGCGTT ATACGGTACC GACCATACTC TCCATGTTGG TGACGGGGAT CTATGTCGCT
ATCGATGGTA TGTTCGTCGG TCACTATCTA GGGGAGACTG GCCTTGCAGG TATGATGCTG
GCTTACCCTG TTGGTGCTCT GCTGTATGCC GTTGGTGCCT TGTTGGGAAT GGGGGGAGCG
GCACTTGTCT CTATCTATTT AGGTCAAGGC TCGGTGCCAA AGGCGAGAAA AATCCTCGGC
AATACCTTTA GTCTTTGCTT AATCTTTGGC GCCTTTTTTG CCATTTTTGG TAGTTATTTT
TCCAGAGATA TATTGCAGCT GTTGGGCGCT GAAGGTGCAG TGCTTGATAG CGCAGATGAT
TATCTGTTTT GGTATTATGC TCTGGGCATC TTTCCTATTA TCTCTGTCGC CTTTACCGCA
CTGCTTAGAA ATGATGGCCG TCCTGGCTTC GTCACTGGTG TACTTATTTT GGGTGGCTGT
CTTAACATTG TTCTCGACTG GCTATTTATC GTTGTGTTTC CCTTTGAGCT GGTGGGAGCT
GCTATTGCAA CCATGATGTC TCAGGCGGTG ACGGGTGGCC TCTGTTTATG GCATTTTCTC
TCAGATAAGA CACGCTTGAA AATCACCCTA TCGCAGATGA AGTTAGAGCT AGACCACTGT
TTTAATATTC TTAAAACTGG CGTACCTAGT TTTTTGATGA ATCTCTATCT CTCTATCGTG
CTAACACTGC ATAACATCGC TTTCTTGTGG GTGGGCTCAC CACTGCATGT TGCGGCCTAT
GGCGTTGTGA GCTACACAGA GGCATTTTTC TACCTTGTAT TTGAAGGGAT AGCTTTTGGC
ACGCAGCCTA TATTTAGCTT CAACGCGGGA GCTGGACGCT ATGACCGCGT GTTTAAGACA
CTGAAAATCG CTTTTGGGAT CACCTTAGTG ACCGCATTTC TCGGTCTGTT ATTTATCTAC
ACTAAGCCGC AATGGGTGGT CTATATTTTT GCCGGTGATA ACCTTGAGCT AACTCCCTAT
GCGATTGAGG GGATGGGGCT CTATTTTTGG GGCTTACCGA TGGAGGGGCT GTTATTGGTA
GGGGCAAGCT TCTTTCAGGC AATTAACTAC TCAAAAGAAG CGTCAATGTT AACCGGGGCT
AAGCTGCTGT TGATAGCCTT CGTTGTCTAT CTGTTTGCTT GGGCATTTGG TACTAACGGT
GTGTGGATAT CGCTGGCTTG TTGCAGCTCA CTCTTAGTTA TCTGGATGGG GTTTGCGTTA
CGGCGGGTGG CGAAACAACT TGAACTATAA
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| Protein sequence | MNPEISSQDL ALVNDPIPKL LWRYTVPTIL SMLVTGIYVA IDGMFVGHYL GETGLAGMML
AYPVGALLYA VGALLGMGGA ALVSIYLGQG SVPKARKILG NTFSLCLIFG AFFAIFGSYF
SRDILQLLGA EGAVLDSADD YLFWYYALGI FPIISVAFTA LLRNDGRPGF VTGVLILGGC
LNIVLDWLFI VVFPFELVGA AIATMMSQAV TGGLCLWHFL SDKTRLKITL SQMKLELDHC
FNILKTGVPS FLMNLYLSIV LTLHNIAFLW VGSPLHVAAY GVVSYTEAFF YLVFEGIAFG
TQPIFSFNAG AGRYDRVFKT LKIAFGITLV TAFLGLLFIY TKPQWVVYIF AGDNLELTPY
AIEGMGLYFW GLPMEGLLLV GASFFQAINY SKEASMLTGA KLLLIAFVVY LFAWAFGTNG
VWISLACCSS LLVIWMGFAL RRVAKQLEL
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