| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3479 |
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| Symbol | |
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| ID | 6117811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4254599 |
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| End bp | 4255228 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635032 |
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| Product | heat shock protein GrpE |
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| Protein accession | YP_001761840 |
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| Protein GI | 170727814 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000435816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0401789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG ATTCAAGTAA AGCGAAACAG AACCAAGTAG ATGAAGCCGT TGAAGGTGAA
ATCCTAACTG AAAGTGAGGT TGAAACCGGT AACGATGAAG CCAGTTTAAT GGATGAACTC
ACTCAGGCGA ATTTCCGCGT TGAAGAGTTA GAACAGGCAC TTGCTGAAGC AAATGCAAAA
ATAGAGGAGC AGAAAGACTC TGTGACTCGT GCTGCAGCGT CAGAGGCTAA TATCCGTCGT
CGTGCGGCTC AAGATGTTGA AAAAGCACAT AAGTTTGCAT TAGAGAAGTT TGCTAATGAG
CTGCTACCTG TGATTGATAA CATGGAGCGT GCGCTTCAAG GTACCAATGC AGAGGCAGAA
GAAACTAAAG CTATCTATGA AGGTGTAGAG CTAACACTGA AGAGCTTTGT GAGCACGGTT
GATAAGTTTG GTCTTAAAGA GGTCAATCCT CATGGTGAGT CTTTTAATCC TGAGCACCAC
CAAGCTATCG GCATGCAACC AAGCCCAGAA TTTCCTGCAA ATACCGTTAT GATGGTGATG
CAGAAAGGCT ATATCCTAAA TGATCGCCTA TTGCGTCCTG CAATGGTGAT GGTTTCTCAA
GGTGGCTCAG GGGTCGATAC CCAAGCTTAA
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| Protein sequence | MSNDSSKAKQ NQVDEAVEGE ILTESEVETG NDEASLMDEL TQANFRVEEL EQALAEANAK
IEEQKDSVTR AAASEANIRR RAAQDVEKAH KFALEKFANE LLPVIDNMER ALQGTNAEAE
ETKAIYEGVE LTLKSFVSTV DKFGLKEVNP HGESFNPEHH QAIGMQPSPE FPANTVMMVM
QKGYILNDRL LRPAMVMVSQ GGSGVDTQA
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