| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3471 |
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| Symbol | |
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| ID | 6117803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4246223 |
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| End bp | 4247134 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635024 |
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| Product | DNA-binding transcriptional activator GcvA |
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| Protein accession | YP_001761832 |
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| Protein GI | 170727806 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000267837 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000102426 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTAGAC GCTTACCTCC CCTGAATTCA GTAAAAGCTT TCGAAGCGGC AGCAAGGCAC
CTTAGCTTTA CTCGTGCAGC CGAAGAGTTG TTCGTTACCC AAGCGGCTGT CAGTCATCAG
ATTAAGGCGC TAGAGGAGTA TCTTGGGTTA AAACTTTTTC GCCGAAAGAA CCGCTCTTTG
CTTCTGACCG AGGAGGGACA GGGGTACTTT TTAGACATTA AAGATATCTT TGTTCAACTG
GCTGAAGCGA CGGACAGATT ATTGGCTCGA AGTGCCATAG GCTCACTAAC AGTAAGTACT
TCACCTAGTT TTGCTATTCA ATGGTTGGTG CCAAGATTAG CTAAATTTAG TGAAAAGAAT
CCAGACATTG ATGTGCGTAT TAAAGCGGTC GATGATGAAG ATGGCTCCCT ATCCGATGAT
GTCGATGTTG CCATCTATTA CGGCCAAGGA AATTGGGCGG GATTAAGGGC TGATAAGTTA
AAAAACGAGG TGTTGATTCC CGTTTGTTCA CCTATGTTAC TCAGTGGACC TAAGCCACTT
GAGAAGCCAA GCGATCTAAA AAATCACACC CTATTGCATG ATACTAGTCG ACATAATTGG
CAAGCTTGGT TTAGACAATG TGGGATTAAT GATATTAATG TGAACCAAGG CCCAATATTC
AGTCACTCCT CTTTAGTGTT GCAAGCAGCA GCTCATGGCC AAGGGGTTGC ATTAGGTTTT
AGTGTTCTTG CTACCCCAGA TATTAAAGCT GGGCGTTTAG TATGTCCTTT CCCCGAGGTG
TTGGTGAGTA AAAATGCTTA CTACCTAGTG TGTCAGCAAA ATCATTCAGA TATAGGTAAA
ATTGCAGCGT TCAGAGAGTG GATGTTAGAT ATGTTTGAGG AGGAGTCGCG CAGTGAACTA
CTTCCTGGTT AA
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| Protein sequence | MSRRLPPLNS VKAFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEEYLGL KLFRRKNRSL
LLTEEGQGYF LDIKDIFVQL AEATDRLLAR SAIGSLTVST SPSFAIQWLV PRLAKFSEKN
PDIDVRIKAV DDEDGSLSDD VDVAIYYGQG NWAGLRADKL KNEVLIPVCS PMLLSGPKPL
EKPSDLKNHT LLHDTSRHNW QAWFRQCGIN DINVNQGPIF SHSSLVLQAA AHGQGVALGF
SVLATPDIKA GRLVCPFPEV LVSKNAYYLV CQQNHSDIGK IAAFREWMLD MFEEESRSEL
LPG
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