| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3468 |
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| Symbol | |
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| ID | 6117800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4244002 |
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| End bp | 4245078 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635021 |
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| Product | putative RNA 2'-O-ribose methyltransferase |
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| Protein accession | YP_001761829 |
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| Protein GI | 170727803 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0401954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000523336 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAACC TATTTTTATA TTGCCGCTCT GGTTATGAAA AAGAGTGTGC AGCTGAGATA
CAACATCGTG CAGCTGAACT CGAAATTGGT GGTTTTGTTA AAACCAACAA AAAAGACGGC
TATGTGATTT TCCAGTGTTT TCAAGCCGGT GATGCAAATA TCTTGGCACA AAAAATTAAA
TTGGATTCAC TGATTTTTGC CAGACAGATG TTTGCCGCTA AAGAGCTGCT GAAAAATCTA
CCTGAACATG ATCGGATCAC ACCGATTATG GAAGCGTTAT CCGATGTCAG GAATGCGGGT
GAGTTAAGGG TTGAAACACC CGATACCAAT GAAGCTAAAG AGCGCACGGC TTTTTGTCGT
AAATTTACGG TTCCTTTAAG ACAGAAGCTA AAAAACGCTG GCAACTTACT TAAAAAAGAG
AATAGCAGTC GACCTATTAT ACATGTCTGT TTTGTGGCAT CGGGCACGGC TTACGTGGGC
TTCTCTTTTA GTAACAATAG CTCTCCCTAT CCGATGGGGA TCCCTAGGCT AAAAATGGCC
AGCGATGCAC CGAGTCGTTC GACGCTTAAA CTCGATGAAG CCTTTATCCA CTTTATTCCC
GAAGAGGAGC AGGAGCAGAG ATTAAGCAGT GGCATGAATG CCGTCGACTT AGGTGCTTGT
CCAGGTGGCT GGACGTATCA GTTAGTGCGT CGCGGTATGT TTGTGGCCGC TGTGGACAAT
GGACCTATGG ATGAAGGTTT GATGGAGACT GGGCAGGTAA AACACTATCA AGCCGATGGT
TTTCGTTTTG AGCCGCCACG TAAAAATATC TACTGGTTAG TGTGTGACAT GATTGAGAAG
CCATCTCGTG TGGCAGAGCT GATTGAAGCT TGGGCGATCA ATGGCTGGTT TAAAGAGGCG
ATGTTTAACC TCAAGCTGCC GATGAAGAGT CGCTATCAAG ATGTCTCGAC GATATTAGAG
ACCATGGCGA CTGTACTTGA GGAGAACGAG ATTAAGAACT TCTCTATCAA GTGTAAGCAC
CTCTACCATG ATCGTGATGA AGTGACTGTG TATTTGAGTC TTAACCCGAC TCAATAG
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| Protein sequence | MINLFLYCRS GYEKECAAEI QHRAAELEIG GFVKTNKKDG YVIFQCFQAG DANILAQKIK
LDSLIFARQM FAAKELLKNL PEHDRITPIM EALSDVRNAG ELRVETPDTN EAKERTAFCR
KFTVPLRQKL KNAGNLLKKE NSSRPIIHVC FVASGTAYVG FSFSNNSSPY PMGIPRLKMA
SDAPSRSTLK LDEAFIHFIP EEEQEQRLSS GMNAVDLGAC PGGWTYQLVR RGMFVAAVDN
GPMDEGLMET GQVKHYQADG FRFEPPRKNI YWLVCDMIEK PSRVAELIEA WAINGWFKEA
MFNLKLPMKS RYQDVSTILE TMATVLEENE IKNFSIKCKH LYHDRDEVTV YLSLNPTQ
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