Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3408 |
Symbol | |
ID | 6117740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4169061 |
End bp | 4170254 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641634963 |
Product | natural resistance-associated macrophage protein |
Protein accession | YP_001761771 |
Protein GI | 170727745 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.913071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAGAT CTGCCCCTAA AATTGGACCG GGCGCCTTTA TCGCCGCCGC CTTTATTGGT CCAGGTACCG TCACCTTATG CACCATAGCC GGCGTCAAAT TTGGCTATGG CTTACTCTGG GTAATGCTGC TCTCAATTGT CGCTACATAC ACCCTACAGG AGATGTCAGC AAGACTTGGC CTTATCACAC AAAAAGGGCT GGCAGCCGTA ATTAAGGAGC AGATAAACTC CACGGTATTG CGTAATATCA CGCTACTGTT GATCTTCTCC GCCATCGTTG TGGGTAACAT CGCCTATGAA GCGGGGAACA TTACCGGGGC CTCATTGGGT CTCTCAGCTA TTTTTGGTGA AAGCAGCCTG CCTTTTCTTC CTCTGCTTAT TGGCTCCGTG TCGGCAATAC TACTGTTTAT CGGCAGTTAT AAACTACTTG AACGAGTACT TATCGGTCTT GTAATAGCAA TGAGTCTCTC CTTTTTTATT ACCGCCATAC TCACTAAACC AGATTTAGGC GCTGTTTTAT CTGGTTTATT CACTCCACAG GTCTCATCAC AGAACATTTT AATGGTGATA GGCTTAATCG GCACGACTGT GGTGCCCTAC AACCTTTTTC TTCATGCCTC CCTAGTTAAG GAGGTGTGGC AGCATCCAAA TGAGCTTAAG TTTGTCAAAC AAGACACCCT TATCTCAATC GGTTTTGGTG GCATCATCTC TATGGCAATC ATCATCTGTG CAGCCTCGAT ACAGGGTGAC AGTGTCGAGA ACCTACTCGA TTTGGCCAAG GGACTAAACC CGCTGTTCGG TACTTTCTCA TCACTCTTCC TAGGGATAGG TTTGTTTGCT GCGGGGATAA CTTCAGCCAT TACAGCGCCA CTGGCTGCAG CCTTTGTGGG GCAACACTGC TTCGGCTGGA AAGCGAACTT AAAAGACTGG CGTTTCAGAA CAATCTGGCT AACTGTCATC ATAGTCGGAG TGATCAGCTC ATCGCTTCAA CTCAAACCGA TAGAGATCAT CAAGTTTGCT CAAATAGCCA ACGGCTTACT GCTTCCCCTA CTTGCATCCC TTCTGCTTTG GATAGTAAAT AAGACCCAAG TGTTGGGCCA GTACAAGAAT AGTCTCCGTC AGAATTTGAT AGGCGCGGTC GTGATTGCTA TCACGCTTGT GTTGAGTATC AAGACACTCT ATAGCCTCTT TTAA
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Protein sequence | MSRSAPKIGP GAFIAAAFIG PGTVTLCTIA GVKFGYGLLW VMLLSIVATY TLQEMSARLG LITQKGLAAV IKEQINSTVL RNITLLLIFS AIVVGNIAYE AGNITGASLG LSAIFGESSL PFLPLLIGSV SAILLFIGSY KLLERVLIGL VIAMSLSFFI TAILTKPDLG AVLSGLFTPQ VSSQNILMVI GLIGTTVVPY NLFLHASLVK EVWQHPNELK FVKQDTLISI GFGGIISMAI IICAASIQGD SVENLLDLAK GLNPLFGTFS SLFLGIGLFA AGITSAITAP LAAAFVGQHC FGWKANLKDW RFRTIWLTVI IVGVISSSLQ LKPIEIIKFA QIANGLLLPL LASLLLWIVN KTQVLGQYKN SLRQNLIGAV VIAITLVLSI KTLYSLF
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