| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3380 |
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| Symbol | |
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| ID | 6117712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4137535 |
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| End bp | 4138227 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634936 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001761744 |
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| Protein GI | 170727718 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000549651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAATAC TGCTAGTCGA AGATGATATT GAGCTACAAA CTAACCTGAA GCAACACCTA
CTTGACGCTA ACTATACCGT CGATGTGGCC AGTGACGGTG AAATAGGCCT CTTCCAAGGG
TGTGAATATC GCTATGACGC TGGGATCATT GATGTGGGCC TGCCAAAGAT GGATGGTATC
GCACTTATCA CCACACTCAG AGAGAAGGAG ATCGATTTTC CCATTCTTAT CTTAACCGCT
CGTGACAGTT GGCAAGATAA AGTAGAGGGA CTCGATGCGG GCGCCGATGA TTACCTAACT
AAACCATTTC AACCCGAAGA GTTAGTCGCC AGACTCAAGG CGCTGATCCG CCGCTCGGCG
GGCAAAGCAA GCCCCTTGAT ACACAACGGC CCTTTTAGTA TCAACACTAG CAGTTTAGAG
GTAAAAAAGG GCGAGCGCCT TATCACCTTA AGTGGTTCTG AATATAAATT ATTTGAGTAC
TTTATGCTCC ATCCTGGTGA AGTAAAATCC AAGACGGTAC TCACCGAACA TATCTATGAT
CAGGACTTTG ACCTCGACTC CAATGTCATC GAGGTCTTTA TCAGGCGGTT ACGTAAAAAG
CTCGATCCTG ATAATCAATA TGGGCTTATT GAAACGCTAC GTGGCCAAGG CTACCGCCTC
GCTACACTGA CCACTGACAA AGCCTCAAAA TAA
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| Protein sequence | MRILLVEDDI ELQTNLKQHL LDANYTVDVA SDGEIGLFQG CEYRYDAGII DVGLPKMDGI
ALITTLREKE IDFPILILTA RDSWQDKVEG LDAGADDYLT KPFQPEELVA RLKALIRRSA
GKASPLIHNG PFSINTSSLE VKKGERLITL SGSEYKLFEY FMLHPGEVKS KTVLTEHIYD
QDFDLDSNVI EVFIRRLRKK LDPDNQYGLI ETLRGQGYRL ATLTTDKASK
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