| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3375 |
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| Symbol | |
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| ID | 6117707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4132030 |
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| End bp | 4134504 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634931 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001761739 |
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| Protein GI | 170727713 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.31809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.581234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAT TTCGTTTTTC ACTACTTGCT GTCGCATGCG CATCCAGCTT TTTATCAGGG
AGTCTTTTTG CTGCTGATAT GGCTGAAAAC AAGCACTCTG AACCTTCTGG ATCTCAAGCT
AAAGAGCTGA AAAACAAGGA TGTAGAACAT ATAACTGTCT ATGGAAGACA GAATCAAGTG
GTTATGAATT CAGGCCTAGC GACTAAATCA GATATGTCTT TAATGGAGAC TCCTGCTGCG
GTGGTTATCG TCGATGAGGA GCTCATTAAG GCGCAAGGCG CTGATAGTTT GCAGGATCTG
GTGCGTAATA TCAGCGGGGT TACTCAAGCT GGTAATAACT ATGGCATTGG CGATAACTTA
GTTATCCGTG GTTTGGGGGC TAACTACACG TTTGATGGCA TGTATGGTGG TGCAGGTTTA
GGTAACACCT TTAATCCCAC TCGTTCGTTA ACCAATGTTG AGTCTATTGA GGTGCTAAAG
GGCCCTGCAA CAGGGTTATA CGGTATGGGA AGCGCTGGTG GCGTGATTAA CCTTATCGAG
AAAAAACCAG AATTTGAATC TCAAAATGAG ATTGGTGTTG AGCTAGGTCA GTGGGATACT
TACGCTCTGT CAATTGACAG TACTGGCGGC TTAACCGATA ACTTGGCTTA CCGAGTTGTC
GCTAAAACTG CCCGCAGCGA TGGATATAGA GATATAGGCA CAGACAGGGA TGAGGTCTAT
ACCTCACTTA AGTATGTGAT TGATGACTCT CAGGATCTGA TGTTGTCGGC CTCCTATATT
AAAGATGCTA TCGCGGTGGA TTCCATCGGT CATCCGATAC GTATCTATAA TGCCGCTTCG
GTAGATGGTA AGTCGGCTGA CCAAGTTGGC TGGGAGGATT TAATAAACGA TCCTAATGGT
AAGGGGATTG TGCTGACTGA CACACAACGT CAAGAGTTAG CAAGCTCCCT TGCTGCTGGT
GATGGTTTAA CCCCTTATGC GTTTGGTAAG GCGGGTATTA TTTCTCCTAT CGCCAAAGAT
AATGAGGGGG AGGAGCTTAG GTTTAAGCTG ACTCATAATA TCTACTTTAA CGATAATCTG
TTTTTAAATC AGCAGTTACA GTATCGGGAC TACACCTCAG GGTTTGCCCG TCAGACGGGT
GCTTACAACT ATGTGTATTG GGATCGAAGA GGCAGCATTA ATGCTGATCC TCGTGCACCA
CTGGTTGAAA ATGGGGTTCT GCATCCCTTT GCTGCGCGTC GTCAGGAGTA CCGTAAAGTT
GAAGCCGATG AGACCTCTTG GCAGTATTTC GCCGATCTAA GGTATGATTT TGAGCTTGGC
GGAATTGAAA ATGAGTTGCT GGTTAATGCT AACTTTGAAG ACCGCAGTAT TCGTTTTAAG
CAACACTCTA TCTATGATGC CGATAAGGTA ATTAAGAACA AAGCGGGTGA TGTTATCTAC
CAAGGAATTC ATCCCTACAT CTACGATATT CGTAACCCTA ATTGGGGAAC TGGTAACTTT
GAAGATTACG ACCCTCTGCT TACCAGTAAC TATAACAAGA CGGTCAACGC TTGGGGTGTC
GGCTTGCAAC ATGTGGGCTA CTTTGGGTAT GGCTTCACCA CTCGTGTTGG TGTGGCATTT
AATGAAATTA AACAAAGCTA TGAGCATTTA GGTGTTGATG CTCGTTATCG CGCTAGCGCA
GCTGAGCCTA CTCCTGAGCA AGATACCACC GATAATGGCA TCACCTATAA CTTAGGTGTG
ACCTATATGC CCACTGATAA TCTCTCCTTT TTTGTTAACC ACTCTAAAGG GCGCACGGCT
TACAGTATTC TTGGCAGTGT TACAGGAGGT GAAAGTGACA GGCCTGACTC TGAATCTGTA
AGTGATGATC TGGGTGTGCG TTATAAGGCT TTTGATGATC AGATGTTGAC CTCTTTGGTG
TTCTTTAAAA GTTCACGAAC CAATTTGAGG TATACAAATC CAGACTATGA GGATGGGGTC
TCAGGACCAA GTGTGTCCCA GTATTTCAAT GATGGCAGTG AGGATACTTC AGGCGTCGAG
TTGGATATGA ATGCCCACCT TAATGATCAA TGGTCGGTGA ATCTAAATGG TGTGTATCAA
GATGCCAGAG ACAAAAAAGA TCCAACTAGA AGCAGCTTTG ATACTCGTCA AAAGGGGGTT
CCCTATGTGA CTGCCAGTGC TTGGGTGACC TATGGTGCAG AGTGGTTTTC GTTGGCAAGC
CCTTTAAATA TCAGCTTAGG TGCCAAGTAT GTCGATGAGC GCAGTACGAA ATCAAGTTCA
TTCGGTATTC CTGATGGTTA TGTGCCTAGT TATACGGTGA TGGATACAGC GGTAAGTTAT
CAGGCCGATA GCTGGAAGCT GCAGCTTAAC GTCAATAACT TGCTCAATGA AAGTTACTAC
AATAAAGCGA TGTTTCTCGG TGGTATGCCA GGTGAAGAGC GTAATGCCAA GCTGACCTTT
AGCTATCAGT TGTAA
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| Protein sequence | MQQFRFSLLA VACASSFLSG SLFAADMAEN KHSEPSGSQA KELKNKDVEH ITVYGRQNQV
VMNSGLATKS DMSLMETPAA VVIVDEELIK AQGADSLQDL VRNISGVTQA GNNYGIGDNL
VIRGLGANYT FDGMYGGAGL GNTFNPTRSL TNVESIEVLK GPATGLYGMG SAGGVINLIE
KKPEFESQNE IGVELGQWDT YALSIDSTGG LTDNLAYRVV AKTARSDGYR DIGTDRDEVY
TSLKYVIDDS QDLMLSASYI KDAIAVDSIG HPIRIYNAAS VDGKSADQVG WEDLINDPNG
KGIVLTDTQR QELASSLAAG DGLTPYAFGK AGIISPIAKD NEGEELRFKL THNIYFNDNL
FLNQQLQYRD YTSGFARQTG AYNYVYWDRR GSINADPRAP LVENGVLHPF AARRQEYRKV
EADETSWQYF ADLRYDFELG GIENELLVNA NFEDRSIRFK QHSIYDADKV IKNKAGDVIY
QGIHPYIYDI RNPNWGTGNF EDYDPLLTSN YNKTVNAWGV GLQHVGYFGY GFTTRVGVAF
NEIKQSYEHL GVDARYRASA AEPTPEQDTT DNGITYNLGV TYMPTDNLSF FVNHSKGRTA
YSILGSVTGG ESDRPDSESV SDDLGVRYKA FDDQMLTSLV FFKSSRTNLR YTNPDYEDGV
SGPSVSQYFN DGSEDTSGVE LDMNAHLNDQ WSVNLNGVYQ DARDKKDPTR SSFDTRQKGV
PYVTASAWVT YGAEWFSLAS PLNISLGAKY VDERSTKSSS FGIPDGYVPS YTVMDTAVSY
QADSWKLQLN VNNLLNESYY NKAMFLGGMP GEERNAKLTF SYQL
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