| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3373 |
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| Symbol | |
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| ID | 6117705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4128979 |
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| End bp | 4130433 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634929 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001761737 |
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| Protein GI | 170727711 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.98747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.499869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAC TGACCCTGAC ATTAACCCAA CCAGCTAAAC CAAAGTTTTT ACAGATAGCC
AGAGCGATAA TCTCCGCTAT AAAGCAGGGA AAAGTTAACG CTAAAGAGCC ACTTCCTTCT
GCTCGTCAAC TTGCCGCCGA ACTGAAAACC AACCGCCATA CCATCATGGC AGCTTACCAA
GAGTTAATCG CCCAAGGCTG GGTTCAATCA ATAGAACGTC AAGGCTATAG GGTTGTTGAA
TCAATTCCTG TGGAATCCAG CCGTCATGCT AGAAAGAGCT TAAAGTGTGA AAAAAATACA
TTCATATGGC AGATAAACCC TACAGCTTTT GAACTCGATA ACAGCAAGCC AGCTCATGAG
TATAGTTACA ACTTTGCAGG GGGAAACCCT GATATCTCCG CCTTTCCTTT CCATGAACTT
AAGCCTTATA TGAGCGAGAG CCTCACTCGG CCGCGCCTTA ATCACTTGTC ATATGGTAAT
AACCGAGGAG ATGATCAGTT TATCTCTCAG CTTGCCACCT ATTTACGCCG AGCCCGCTCA
ATCACAAATA AGGAGATCAT TACCGTTAAT GGCTCGCAGG AGGCGTTATA TTTGCTTTCT
CAGGTGCTGC TAAAACCTGG TTCTAAAGTT GCTGTAGAAT CCCTAGGCTA CCGGCCTGCA
TGGAATGCTT TTACTACTGC TGGCGCAGAG CTAGTCGCCA TCAAACAGCA CTCAAAAGGG
ATAGATATTG AGCACTTAAC CCAGTTAGTG AAGCAGCAAA GCATCTCTCT TATCTATCTA
ACCCCTCTGC ATCAATACCC CACCACAGTG ACTCTGCCAA TCCATGAAAG GGGAAAAATT
TATCAACTCG CCGCGAAATA CCAGATCGCC ATCGTTGAAG ATGATTATGA TCATGAGTTT
CACTACTCAA GTCAGCCCTT AGCCCCTTTA GCCGCAAACG ATCCACAAGG GCTAGTTATC
TACCTATCAA CATTCTCAAA AATTATGTTC CCTGGCTGCC GTATTGGCTA TATGGCCGTC
GATAAATCAT TAGCGCCAGC ACTTATCAAC TATCGAAGTG TGATGAATCA TAAGCCAAAT
GTGTTAATGC AAGATGCCAT CGGACGTTGG ATGAAGGAGG GCTCCTTTGA AAGACATTTG
CGGCGCACTA CTAAGCAATA TCAACAAAGA CGCAATAACT TAATCTCCCA ATTAGAACAG
TACCAAGAAC AAGGGCTAGA TATTAGCTTC ACCATCCCCG CAGGCGGTAT GGCTATCTGG
TTAGATGTGA AAAAAAATGC CAAAGAGTTA GAGAGATTTG CTCTAGCTCA TGATATCTAT
CTGGTCTCTG AGTCAGGTTT TCACTTAGAT AAAGAGAATG ATGAAAATCG CTATATTCGT
CTTGGTTTTG CGGGAATGAA ACCGGAAAAG ATGAATCAGG GCTTGGCCAT ACTGTTCAGT
TATTTTAACC AGTGA
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| Protein sequence | MKALTLTLTQ PAKPKFLQIA RAIISAIKQG KVNAKEPLPS ARQLAAELKT NRHTIMAAYQ
ELIAQGWVQS IERQGYRVVE SIPVESSRHA RKSLKCEKNT FIWQINPTAF ELDNSKPAHE
YSYNFAGGNP DISAFPFHEL KPYMSESLTR PRLNHLSYGN NRGDDQFISQ LATYLRRARS
ITNKEIITVN GSQEALYLLS QVLLKPGSKV AVESLGYRPA WNAFTTAGAE LVAIKQHSKG
IDIEHLTQLV KQQSISLIYL TPLHQYPTTV TLPIHERGKI YQLAAKYQIA IVEDDYDHEF
HYSSQPLAPL AANDPQGLVI YLSTFSKIMF PGCRIGYMAV DKSLAPALIN YRSVMNHKPN
VLMQDAIGRW MKEGSFERHL RRTTKQYQQR RNNLISQLEQ YQEQGLDISF TIPAGGMAIW
LDVKKNAKEL ERFALAHDIY LVSESGFHLD KENDENRYIR LGFAGMKPEK MNQGLAILFS
YFNQ
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