Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3341 |
Symbol | |
ID | 6117673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4094879 |
End bp | 4097455 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641634897 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_001761705 |
Protein GI | 170727679 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.285192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000411572 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAGCGA TCGACAGCCA AGATTTAGAA AAACATACCC CTATGATGCG TCAGTATTTG ACTTTAAAAG CCGAAAATCC AGATGTACTT CTTTTCTACC GTATGGGCGA TTTCTATGAG CTTTTTTACG ATGATGCCAA GAAGGCATCT GAGCTATTAG GGATCTCACT TACAGCAAGA GGCAAAAGTG GTGGTGATCC TATCCCTATG GCTGGCCTTC CCTACCACGC TGTAGAGGGC TATTTGGCAA AGCTGGTTCA ACTGCGAGTT TCGGTTGCTA TCTGTGAACA AGTTGGCGAT CCAGCGACAT CTAAAGGCCC GGTTGAGCGT AAGGTGGTTC GACTCGTCAC ACCAGGCACA CTCACCGATG AAGCGTTACT GCAGGAGAGA CAAGATAATC TACTTGCAGC GGTTTATCAC GGTAAAAAAG GCTTTGGCTA TGCCACATTA GATATTAGTT CGGGGCGATT TGTCATTGCG GAACTTGAGT CCTGTGAAGC ACTAGAAGCA GAGCTTCAAC GTACCAGTCC AGCTGAGCTT CTCTACAGTG AAGACTTCTC TGAGATGAGC CTGATTTCAG CATTTGAAGG CACCCGCCGT CGCCCTGAGT GGGAGTTTGA TTTCGACACA AGTCAAAAGC TTCTGCTTGA TCAATTTGGT ACCAAAGATC TGCAAGGTTT TGGGTTAGAT GGTGCTCGGC TATCTCTTCA GGCAGCCGGT TGTCTTATGC AGTACGTAAA AGACACTCAA CGCACAGCAC TCCCTCATAT CAACTCAATA GTCAGGTTTA ATCAAGGCGA TAGCATCATT CTCGATGCTG CAACCAGACG TAACCTAGAG CTAACGATGA ACCTCCAAGG GGGCCACTCA AATACGCTTG CCACTGTGCT CGATAATACA ACGACTCCGA TGGGAAGTCG TATGTTACAA AGATGGATCC ACGAGCCACT GCGTGATCGT CAGCGTATCG AAGCGCGTCA AAGCGCCCTC GAAGAGATAT TGGAGAATGG TCTCTATGAT GAGTTGCACC CTCTATTAAA GTCACTGGGT GATGTTGAGC GGATAACCGC GAGGCTTGCA TTGAGAAATG CACGTCCCAG AGACTTCTCT CGCCTTAAGC ATGCCTTAGC GATACTGCCA GAGATCCAAC AAATACTGGC CAGATGCCAA TCGGCTCACC TTCAATCTTT AGCTAGAATT ATCAGTGAGT TTCCAGAGGA ACTAGCATTA CTTGATAGTG CGATCGTCGA TAATCCTCCT ATGCTTATCC GTGATGGTGG GGTGTTAAAG CCTGGCTACA ATGCTGAATT AGATCAATGG CGTGACCTAA GCCAAGGCGC AACAGACTAC TTAGCTGAGC TTGAGGCAAG AGAAAAAGAG GCCACTGGCA TCTCGACGCT AAAAGTCGGC TACAATCGTG TACACGGTTA CTATATTGAG GTCAGTCGGA GAGAATCTGA TCTTGTGCCT CTGAGTTACC AGCGCAGACA GACACTGAAA AATACTGAGC GTTATATTGT CGCAGAGCTA AAGGAGCACG AAGAGAAAGT GCTCTCCAGC CAAGGCAAAG CCCTAGCCCT TGAGAAGCAA CTATGGGATC AACTGTTCGA TCTTATCTTG CCTCAGCTCC ATGAATTGCA ACTTTTCGCC CAAGGTGCAG CAGAGCTAGA TGTACTCGCA AACTTTGCAG AGCGAGCCGA CACGCTCAAC TATCAAAGAC CAGTGTTAAC CGATATCCCT GGTATTCAAA TAGAGTCTGG TCGACACCCT GTAATTGAAC AGGTGAGTCA AACTCCATTC ATTGCCAATC CAGTGACCTT AAGTCCTGCG AGAAAGATGT TGATAGTGAC AGGTCCAAAT ATGGGCGGTA AATCGACCTA TATGAGGCAA GTGGCCTTAA TCACCTTGAT GGCACATATA GGCTGTTATG TTCCAGCTCA AAGCGCGACT ATCGGCCCAG TTGATCGCAT ATTCACTCGC ATAGGCGCCG CCGATGATCT CGCCTCTGGT CGCTCAACCT TTATGGTCGA GATGACTGAA ACCGCCAATA TACTTCACAA TGCGACACCA AAGAGTTTAG TACTGATGGA TGAGATAGGT CGAGGCACAT CGACTTACGA TGGTCTATCT CTAGCTTGGT CTGCGGCGGA ATATTTAGCG CAGAAAATTG AGGCCATGAC ACTATTCGCA ACTCACTATT TTGAGCTAAC TCAACTACCA GAGCTAATAT CAAATGTGGC GAATGTACAC TTAGATGCAA TTGAACACGG TGACACGATC GTCTTTATGC ACGCAGTGCA AGATGGCGCG GCCAGCAAGA GTTACGGACT TCAAGTTGCC GCACTTGCAG GAGTACCTAA CCCTGTCATT TTGGCTGCAA AACACAAGCT ACACCATCTG GAAAGCCGTG ATAATCACAA TACACAGCAG ACAGACTCAA GTGGTGTACA GCAAAGTATG GTATTTCCAG ACCCTATAAA ATCACCTCTT GAGGAGGCGA TGGAATCAAT CAGGCCAGAT GAGCTTAGCC CTAAACAGGC TTTGGATATC CTGTATAGAT TAAAGGATTT AAGTTAA
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Protein sequence | MKAIDSQDLE KHTPMMRQYL TLKAENPDVL LFYRMGDFYE LFYDDAKKAS ELLGISLTAR GKSGGDPIPM AGLPYHAVEG YLAKLVQLRV SVAICEQVGD PATSKGPVER KVVRLVTPGT LTDEALLQER QDNLLAAVYH GKKGFGYATL DISSGRFVIA ELESCEALEA ELQRTSPAEL LYSEDFSEMS LISAFEGTRR RPEWEFDFDT SQKLLLDQFG TKDLQGFGLD GARLSLQAAG CLMQYVKDTQ RTALPHINSI VRFNQGDSII LDAATRRNLE LTMNLQGGHS NTLATVLDNT TTPMGSRMLQ RWIHEPLRDR QRIEARQSAL EEILENGLYD ELHPLLKSLG DVERITARLA LRNARPRDFS RLKHALAILP EIQQILARCQ SAHLQSLARI ISEFPEELAL LDSAIVDNPP MLIRDGGVLK PGYNAELDQW RDLSQGATDY LAELEAREKE ATGISTLKVG YNRVHGYYIE VSRRESDLVP LSYQRRQTLK NTERYIVAEL KEHEEKVLSS QGKALALEKQ LWDQLFDLIL PQLHELQLFA QGAAELDVLA NFAERADTLN YQRPVLTDIP GIQIESGRHP VIEQVSQTPF IANPVTLSPA RKMLIVTGPN MGGKSTYMRQ VALITLMAHI GCYVPAQSAT IGPVDRIFTR IGAADDLASG RSTFMVEMTE TANILHNATP KSLVLMDEIG RGTSTYDGLS LAWSAAEYLA QKIEAMTLFA THYFELTQLP ELISNVANVH LDAIEHGDTI VFMHAVQDGA ASKSYGLQVA ALAGVPNPVI LAAKHKLHHL ESRDNHNTQQ TDSSGVQQSM VFPDPIKSPL EEAMESIRPD ELSPKQALDI LYRLKDLS
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