| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3336 |
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| Symbol | |
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| ID | 6117657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4084999 |
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| End bp | 4086807 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634881 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_001761700 |
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| Protein GI | 170727674 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000131691 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAGC CACTTGCGTT AACCGATGTC GTCCTAAGAG ATGCACACCA ATCAATACTG
GCCACGCGTC TTCGCACCGA AGATATGCTG CCTATCGCAC CACTGCTGGA CAAAGTTGGT
TTCTGGTCTT TGGAGTCATG GGGAGGAGCC ACATTCGATT CCTGTATTCG TTATTTAGGC
GAAGATCCGT GGGAGCGGAT CCGTGAGTTG AAAAAGGTGA TGCCTAATAC TCCTCAGCAG
ATGCTTTTAC GCGGACAGAA CCTATTAGGT TACCGTCACT ATGCTGATGA TCTTGTTCAT
AAGTTTGTTG AGCGTGCTCA TACTAATGGT GTTGATGTAT TTCGTGTTTT CGATGCGATG
AATGATGTTC GCAACCTAGA GACTGCAGTT AAGTCTGTGG TTGAAGTGGG CGGTCATGCT
CAGGGAACCA TCTCTTATAC AACAAGCCCT GTACATAACC TAGATACCTG GGTCGATATG
GCCAAACGCC TTGAAGATAT GGGCTGTAAC TCTTTATGTA TTAAGGATAT GGCAGGTCTT
CTTAAGCCTT TTGATGCTTT CGACATGATT AGTCAGATTA AATCTCAAAC TGATCTTGTG
GTCTCTATGC ATTGTCATGC CACCACAGGC TTGAGCACAG CAACCTACCA GAAGGCGATA
GAGGCAGGAA TTGATGTGCT AGATACCGCC ATCTCTTCGA TGAGCCAGAC CTATGGTCAC
AGCGCAACAG AGACACTCGT TGCTATGGTT GAAGGGACTG ACAGAGCAAC AGGTTATGAT
ATGGCTCTGC TTGAAGAGAT ATCAGCCTAC TTTAGAGATG TGCGCAAGAA GTACGCTCAA
TTTGAGGGAG AGCTCAAGGG CATTGATTCT CGTATTCTTC GTGCTCAGGT GCCCGGCGGG
ATGCTGACCA ATATGGAGAG TCAGTTAAAG GAGCAGGGCG CTGCTGACAA GCTAGATAAA
GTGTTAGAGG AGATCCCTAG AGTACGTGAA GATCTTGGTT TCCTTCCCTT AGTGACGCCA
ACATCTCAGA TAGTTGGAAC GCAAGCGGTT ATCAATGTAT TGACTGGTGA GCGTTACAAG
TCGATGACTA AAGAGACCGA AGGGGTACTA AAAGGTGAGT ATGGCGCGAC ACCAGCACCT
GTTGATGAAG CACTGCAAGC TAAGGTACTT AATGGTGCTG AAGCGATCAC TTGTCGCCCT
GCCGATCTGC TATCACCTGA ACTGGAAAGG TTAACAGATG AGCTTAAGTC AAAAGCAGCC
GAAGAGAGTT TGGAGTTGGC AAGCGAGCTT ATCGATGATG TGCTGACCTA TGCTCTATTT
CCACAAATTG GTTTGAAGTT CATTAAAAAC AGAAACAACC CAGATGCTTT TGAGCCTAAA
CCTGAGCTAG CTGCTAAGTT GTCCGCACAA GCCGCAGACA CTCAGCAGGA GGTGGCCAAG
CAGGAGCGAG GACCTGAAAC TTATACGGTG AATGTCCAAG GGCAGAGCTT TGTTGTTGAG
GTGTCACAGG GGGGCGAAAT TAGTCAAATC AGCTCAACAG AGAATGTGGT TCCCTTTACG
CCTGCTACGG CTGCACCAGA ACAAAGTGGC GAAATCAAGC TTGAGATGAA CGCACCACTT
TCAGGCAATA TCTTTAAAGT GAATGTCTCC CCAGGTGATA CCGTTCGCCA AGGTGATGTG
GTTATTATCT TAGAAGCAAT GAAGATGGAG ACCGAAGTGC GCGCAGAGAT TGACGGTGTG
ATCAGTAAAA TTTGGGTTAA AGAGGGTGAC TCTGTCGCCG TAGGCCATCA ACTGTTAGGT
CTAGCATAG
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| Protein sequence | MSKPLALTDV VLRDAHQSIL ATRLRTEDML PIAPLLDKVG FWSLESWGGA TFDSCIRYLG
EDPWERIREL KKVMPNTPQQ MLLRGQNLLG YRHYADDLVH KFVERAHTNG VDVFRVFDAM
NDVRNLETAV KSVVEVGGHA QGTISYTTSP VHNLDTWVDM AKRLEDMGCN SLCIKDMAGL
LKPFDAFDMI SQIKSQTDLV VSMHCHATTG LSTATYQKAI EAGIDVLDTA ISSMSQTYGH
SATETLVAMV EGTDRATGYD MALLEEISAY FRDVRKKYAQ FEGELKGIDS RILRAQVPGG
MLTNMESQLK EQGAADKLDK VLEEIPRVRE DLGFLPLVTP TSQIVGTQAV INVLTGERYK
SMTKETEGVL KGEYGATPAP VDEALQAKVL NGAEAITCRP ADLLSPELER LTDELKSKAA
EESLELASEL IDDVLTYALF PQIGLKFIKN RNNPDAFEPK PELAAKLSAQ AADTQQEVAK
QERGPETYTV NVQGQSFVVE VSQGGEISQI SSTENVVPFT PATAAPEQSG EIKLEMNAPL
SGNIFKVNVS PGDTVRQGDV VIILEAMKME TEVRAEIDGV ISKIWVKEGD SVAVGHQLLG
LA
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