Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3278 |
Symbol | frr |
ID | 6117597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4021197 |
End bp | 4021754 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634822 |
Product | ribosome recycling factor |
Protein accession | YP_001761643 |
Protein GI | 170727617 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000213543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000283754 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTAAACG AAATTAAGAA AGATGCTCAG GATCGCATGG ATAAATGCGT TGAAGCGACT AAGACACAGA TGGCTAAGGT TCGTACTGGC CGTGCACATC CAAGCCTACT AGATTCGATT AAAGTGCCTT ACTACGGCTC TTTAACGCCA CTAAAGCAAG TGGGTAATGT TTCTATTGAA GATTCACGTA CTCTGGCTAT TTCAGTATTT GATAGCACGA TGATCCCAGC TGTAGAGAAG GCGATCATGA GCTCAGATCT AGGTCTAAAC CCTATGTCTG CTGGTGCAAC AATCAGAGTG CCGCTTCCTG CATTAACTGA AGAGCGTCGT AAAGACCTTA TCAAAGTGGT TCGTGCTGAA GCTGAAAACG GCCGTATCGC TGTTCGTAAC GTTCGTCGTG ACGCTAACTC AGATGTTAAA GCCCTAGAGA AAGAGAAAGA GTGTACAGAA GATGATGTAC ACCGCAGTGA AGATGAAGTG CAAAAGTTTA CCGATGCACA CATTAAACTG ATTGATGAGA TATTGGCTGC AAAAGAAGCA GAGTTGATGG AAGTCTAA
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Protein sequence | MLNEIKKDAQ DRMDKCVEAT KTQMAKVRTG RAHPSLLDSI KVPYYGSLTP LKQVGNVSIE DSRTLAISVF DSTMIPAVEK AIMSSDLGLN PMSAGATIRV PLPALTEERR KDLIKVVRAE AENGRIAVRN VRRDANSDVK ALEKEKECTE DDVHRSEDEV QKFTDAHIKL IDEILAAKEA ELMEV
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