Gene Swoo_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3278 
Symbolfrr 
ID6117597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4021197 
End bp4021754 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content44% 
IMG OID641634822 
Productribosome recycling factor 
Protein accessionYP_001761643 
Protein GI170727617 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000213543 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000283754 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTAAACG AAATTAAGAA AGATGCTCAG GATCGCATGG ATAAATGCGT TGAAGCGACT 
AAGACACAGA TGGCTAAGGT TCGTACTGGC CGTGCACATC CAAGCCTACT AGATTCGATT
AAAGTGCCTT ACTACGGCTC TTTAACGCCA CTAAAGCAAG TGGGTAATGT TTCTATTGAA
GATTCACGTA CTCTGGCTAT TTCAGTATTT GATAGCACGA TGATCCCAGC TGTAGAGAAG
GCGATCATGA GCTCAGATCT AGGTCTAAAC CCTATGTCTG CTGGTGCAAC AATCAGAGTG
CCGCTTCCTG CATTAACTGA AGAGCGTCGT AAAGACCTTA TCAAAGTGGT TCGTGCTGAA
GCTGAAAACG GCCGTATCGC TGTTCGTAAC GTTCGTCGTG ACGCTAACTC AGATGTTAAA
GCCCTAGAGA AAGAGAAAGA GTGTACAGAA GATGATGTAC ACCGCAGTGA AGATGAAGTG
CAAAAGTTTA CCGATGCACA CATTAAACTG ATTGATGAGA TATTGGCTGC AAAAGAAGCA
GAGTTGATGG AAGTCTAA
 
Protein sequence
MLNEIKKDAQ DRMDKCVEAT KTQMAKVRTG RAHPSLLDSI KVPYYGSLTP LKQVGNVSIE 
DSRTLAISVF DSTMIPAVEK AIMSSDLGLN PMSAGATIRV PLPALTEERR KDLIKVVRAE
AENGRIAVRN VRRDANSDVK ALEKEKECTE DDVHRSEDEV QKFTDAHIKL IDEILAAKEA
ELMEV