Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3265 |
Symbol | |
ID | 6117584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4004507 |
End bp | 4005919 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641634809 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001761630 |
Protein GI | 170727604 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.867953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.290599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CTAGTTTTAA TACATCAGCC TTGATTGAAG AGAGTATTAA GTCTGCGAAG ATCAATGTTG GTGCTAAGTT AGTACTGGCT TACAGCGGAG GGGTTGACTC AGAAGTACTA GCTCAAGGTC TATCCTTATA TGCTAAATCG CACCCAGAGT TCCGTTATCT GTTAGTGCAT GTTCACCATG GGCTGAGTCG TAATGCCGAT GCTTGGGTAA CACATTGCCA GAAGCAAGCG CTAGATTATC AACTTCCGAT CGAGGTTGTT CAGGTTCAGG TAAAAACAGG TCCTAGACTT AGCATTGAAG CAGAAGCTCG TCGCGCACGT TATAAGGCGA TAACGTCCTT GATGGACAGT GCAGATGTGT TGTTAACTGC GCACCACTTA GATGACCAAT TAGAGACAGT CCTGTTAGCA CTAAAGCGTG GGCTAGGGCC TAAAGGTCTG TCAGCTATGG GTGCATTGCA GGTGTTCGAT GGGGATAAGC AACTGCTCCG CCCCTTACTG AATGTCAGCC GTGAGCAGAT AGAAGCCAAG GCTGCGAGCC TATCTCTGCC GCATATCGAA GATGAAAGTA ATACTGATGA TAAGTATGAC AGGAACTTTT TACGTCTGCA GATCATCCCT AAGTTAAAAT CTAGATGGAG CGCTATTGCG ACGACTGCAA GCCGTAGTGC AGCCCTTTGT GCTCAACAAC AAGCGGTCAT TGATGATGAG GTAAGTGCTC GCTTACCTAA CTTCATTGAG CTGGTGCCAT ACGGCGAAGG AACTGCATTA AATCTGGACT TATTAAGCCA TCAAACTCCC AATTGGCAGG CATTGTTGCT TAGAGGGTAT ATTGAGAGCT CTGGCTTTGC CCCTGTATCT CAAATCCAGC TTGAACAGTT ATTGTCTCAG TTACTGACCG CTAAGCCTGA TGCTAACCTT GAAGTGAGAA TCGCTGATAT GTTGGTGCGC AGGTTTAGAG AGAAAGCATA CCTAAGCTCA TACAGACCCC ATAAGCCAAA ATCACTGGAG AGTATTGAGC TGACTCTTGA GAGTGAAGTT CATTTCGTTC AAGAGATAAA CATTCCGCTC TTATCTAATA TCAGAGTTGA AGTGCTTGAG GATGATGGGG GAGAGAGAGT TCGTCTGCCA TTGATTGAGG AAAAGGTATC GGTTCGTTTC TCTGCTGTTG GCAGTTTGCG TTGCCATCCA CATAACAGAC AAAAGGGCAG GGAACTTAAA AAACTTTGGC AGGAGTATGG GGTGCCGCCC TGGGAGAGGG AGCGAGTCCC ACTTATTTTT TATAATGAAA AGCTTGTCTG CGCTGTTGGT TATTGGGTTG AGCACTCTTT TCAATCTGCA GAGCATGAAA CGGGTTTACG TTTCTCGATA GCTATTGTTT CTAATGAGTG TGAGTCGATT TAG
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Protein sequence | MTEPSFNTSA LIEESIKSAK INVGAKLVLA YSGGVDSEVL AQGLSLYAKS HPEFRYLLVH VHHGLSRNAD AWVTHCQKQA LDYQLPIEVV QVQVKTGPRL SIEAEARRAR YKAITSLMDS ADVLLTAHHL DDQLETVLLA LKRGLGPKGL SAMGALQVFD GDKQLLRPLL NVSREQIEAK AASLSLPHIE DESNTDDKYD RNFLRLQIIP KLKSRWSAIA TTASRSAALC AQQQAVIDDE VSARLPNFIE LVPYGEGTAL NLDLLSHQTP NWQALLLRGY IESSGFAPVS QIQLEQLLSQ LLTAKPDANL EVRIADMLVR RFREKAYLSS YRPHKPKSLE SIELTLESEV HFVQEINIPL LSNIRVEVLE DDGGERVRLP LIEEKVSVRF SAVGSLRCHP HNRQKGRELK KLWQEYGVPP WERERVPLIF YNEKLVCAVG YWVEHSFQSA EHETGLRFSI AIVSNECESI
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