| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3254 |
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| Symbol | |
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| ID | 6117573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3987126 |
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| End bp | 3989978 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634798 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001761619 |
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| Protein GI | 170727593 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.647514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA ATAAAAAGAC CTATGGTGTT GGGCTGAAAT TAAGCTATTT AAGTGTTTGC
TTATGCAGTG CGTTAGCAAC ACATGCGTTA GCTGCAGAGG AGGAAGACAA GCAAGCAGCG
GATGAGTCAA TTGAACGTGT AAGCGTGGTT GGCTCTAATA TTAAGCGCGC TGTCGACAGC
GGCTCACTCC CTGTCACTAT GCTGACAGAG GAGGACATTG AAAACACGAT GGCGATGTCA
GGCGATGACC TTTTACGTCA AATTCCGCAG ATGGGTGAAG TTAATTTTGG TGCGTCAACC
GGTAATGGTG GCGTGAACGA TGCCCGTGGA GATGTAGCGT CAATTAACCT CAGAGGATTG
GGTACGGGGA ATACCTTAAC CTTACTCAAT GGTCGTCGTG TTGTGACCCA TCCCGGTACT
CAGACCGAAA ATTTTGTACC AGTTACAACG GTTAACTCGA ATGCGCTTCC TATTTCGGGT
CTACGTTCAT TAGAGGTGCT CCGCGATGGC GCTGCCGCGA TTTATGGCTC TGATGCCGTT
GCTGGTGTGG TGAACTACAA GTTAAAAGAT GATTATGAAG GACATAAAGT CTCTTTCTCC
TATGGTGGTT CTGAAGGCAC CTCTTTGCGG GAGGGAACGA TGAGCTATTT AGGTGGCATA
TCACTCAACG AAGGCAAGAC TCACCTTACT GGTTCATTAA GCTACTTTGA CAGAGAAGGT
ATGATGGCAT CAGAGCGAGA CTATGCTAAA AGCCATGACC TACGTGAGTA CCCTACACTG
CCTGAAGGCT TTATTGGTGA TACCCAGCTT GATAACCGTA CCACGACAAC CCCCTGGGGA
GAGTTTAGAA GTGGGTCGTT AAAAACTTTT CATATTCAGC CAGACAGCAT GGATGGATGT
GTTCAAGATC TCGGTAATGG GATCTGCGCT GATAAAGGTA GTTTGTCGAG AGATCTTCGT
TTCGACCGCG GTACAACACG CTCTTTAGTA TCAGATGTCG ATAGACTCAA TTTTTATGGT
TACGCTACCC ATGATCTGAG TGATTCACTC GAGTTTTTCT CAGAAATTAC CTATTACAAG
GCCAACTCAG AGCGAAGGCG TGAACAGGCT GGTAACTTAA CGGCGCAGAG ATTTACTATC
GATGAGAATG CCTACTACAA CCCGTTTGGA GAGAGTGTGG ATGTTAGGCG TTACCGTCCG
ATAGATGCGG GCCCAAGAAT CATCAATGTC GAAAACACCA GTTACCGTAT TTTGGGGGGC
TTTAAAGGAA ACTTCGGCGA CTGGGACTGG GACAGCGCGA TCTTCTATAC AGCTGCTGAA
ACTAACGATG TTGCTAACCG AGTGCAGGCG AGTAAATTTC AAGCCGCAGT CAACAGTACC
AACCCAGATC TGGCGTACAA TATCTTTAAT GGCGGAGATA TTAATAATCC CAATGCAGGG
GATGGAACGC TAAATTCTCA AGCGGTGATC GATCAGTTTA TGGTCGATGT ACACAGAGAT
GGTAAAACGA GCTTAGCGTC AATAGACTTT AAAGTGAGTA ACGGACAACT TTGGAGCCTA
CCTTCAGGTG ATATTGGTCT TGCGATGGGG GTTGAATATC GCAGAGAGAC CTTTGAGGAT
ATCCGCGATC CTCTACTAAA TGGCAGTAAC CCTTTTGTTG ATGCAGTCAC AGGTGAGGAG
CTTTCTGGTA GTGATGTGTT GGGGTCAAGT CATACGCCAA ATTCAGATGC AGCAAGAAAT
GTCGCTTCAG TTTATGCTGA ACTACTTATC CCGCTGTTAG ATTCCTACTC GCAATACCTT
GAGCTGCAGA TTGCTGGCCG CTATGAGAAC TTCTCCGATG TGGGATCGGC GGCTAAACCT
AAAGTTGCGC TCTACTGGGA ACCTATCGAT TGGTTAAGTA TTCGTGCTTC TTATGCTGGT
GGCTTCAGGG CGCCAGGTTT GCCGCAAGTG AGCGCAGAAG GTGTGCCAAG AAGTAATGGA
CTCTATGATC CTGTATTGGA CGAGACTTAT GGCATTATCG ATATTCGCAG TGGCTCTACT
GATCTAAAGC CTGAAGAGTC GGTGAATAGC TCAGTTGGTT TTGTGTTCAA CCCAACCAGT
AATTTTACCT TTACGGCTGA CTATTGGCAG ATAGAGCAGG AGAACATTGT TGGTATCTTA
CCCGGCTCAT CTCATCTGCT TTATGACTCG CTTCTTCGTA GTCAAGGTTC ATCTAATCCT
GCAGTGCTCC GTGATGACAG CACCATGGAG GTGATTCAGA TCAATAACGA TTATTTGAAT
CTGAATATTC GTAATATTGA AGGCGTCGAC TTCAGTTTCC TTTATTCGCT TGAAACTGAC
ATTGGTGAAT GGGATTTCTC TGCTAACGTG GCTCATCTGA TTAAGTTCTA TCAAGATGCA
GATCCTATCT CAGCCGAGTT AATAGCGGCG CAAGAGGCGG GGAACCCTGC CGTTCCAGCT
GATAGAACGG TTGCGGGGGC CGGCGATCTC ATTAAAGAAA ATGGCCGTCC TGAATGGCGT
GGTAGAGCTG AGGTAAACTG GCGTTTAGAC CAGATCGGTG CTGGAGTTAG TTACAACTAC
ATCAGTGATG TGATTGATAC GAGTGCGACT TACACCAATG ACAATGAGGA GGTAATTAAG
CTGCCCGTAG ACAATTTTGA AACCATCAAT GTTTATGCTG ATTACCGTTT TAAAGGGGCT
CACTTCCTTG ATAATAGTAA GCTGCGTTTA GGCGTCAGAA ACATCACTGA CGAACAGCCA
CCTTTGGCTG ATGAGTTAGC CCACGGTTAC TTTGGCAGTT TACATTCAAA CCGTGGTCGA
TACTTTTATA TGAACTTTAG TAAGTCATTC TAA
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| Protein sequence | MNNNKKTYGV GLKLSYLSVC LCSALATHAL AAEEEDKQAA DESIERVSVV GSNIKRAVDS
GSLPVTMLTE EDIENTMAMS GDDLLRQIPQ MGEVNFGAST GNGGVNDARG DVASINLRGL
GTGNTLTLLN GRRVVTHPGT QTENFVPVTT VNSNALPISG LRSLEVLRDG AAAIYGSDAV
AGVVNYKLKD DYEGHKVSFS YGGSEGTSLR EGTMSYLGGI SLNEGKTHLT GSLSYFDREG
MMASERDYAK SHDLREYPTL PEGFIGDTQL DNRTTTTPWG EFRSGSLKTF HIQPDSMDGC
VQDLGNGICA DKGSLSRDLR FDRGTTRSLV SDVDRLNFYG YATHDLSDSL EFFSEITYYK
ANSERRREQA GNLTAQRFTI DENAYYNPFG ESVDVRRYRP IDAGPRIINV ENTSYRILGG
FKGNFGDWDW DSAIFYTAAE TNDVANRVQA SKFQAAVNST NPDLAYNIFN GGDINNPNAG
DGTLNSQAVI DQFMVDVHRD GKTSLASIDF KVSNGQLWSL PSGDIGLAMG VEYRRETFED
IRDPLLNGSN PFVDAVTGEE LSGSDVLGSS HTPNSDAARN VASVYAELLI PLLDSYSQYL
ELQIAGRYEN FSDVGSAAKP KVALYWEPID WLSIRASYAG GFRAPGLPQV SAEGVPRSNG
LYDPVLDETY GIIDIRSGST DLKPEESVNS SVGFVFNPTS NFTFTADYWQ IEQENIVGIL
PGSSHLLYDS LLRSQGSSNP AVLRDDSTME VIQINNDYLN LNIRNIEGVD FSFLYSLETD
IGEWDFSANV AHLIKFYQDA DPISAELIAA QEAGNPAVPA DRTVAGAGDL IKENGRPEWR
GRAEVNWRLD QIGAGVSYNY ISDVIDTSAT YTNDNEEVIK LPVDNFETIN VYADYRFKGA
HFLDNSKLRL GVRNITDEQP PLADELAHGY FGSLHSNRGR YFYMNFSKSF
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