Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3234 |
Symbol | |
ID | 6117553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3961669 |
End bp | 3963243 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641634778 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001761599 |
Protein GI | 170727573 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.22979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTT TAAGTTACGC CGATTCGGCG CTTTCATTGC TACCTCCTGT GGTTGCGATT CTGCTGGCAA TTGTGACTCG TCGCGTCTTG CTCTCTTTAG GTGTAGGGAT ATTGCTCGGA GCTGTGCTGA TCTCAGATTT TTCTGTTGGC GGTTCTGGCA AATACCTAGC TCAACAGGTA ACAGGTCTGT TTTGGGATGA TGGCAGCCTC AATAGCTGGA ACCTTTATCT GTTAGGTTTT CTGATCCTAC TGGGGATGAT CACTGCACTT ATCACGGTCA GTGGTGCGGC TAAAGCATTT GCCGATTGGG CAAGAACCAA AATTCGTAAT AAACGCGATG CAAAGCTTCT CACCATGTTC TTAGGTTGTG TTGTCTTTAT CGATGATTAC TTCAATAGCT TGGTCGTGGG CAGTGTCGCA AGACCTTTAA CCGACAGATA TTACATCTCG CGCAGTAAGC TGGCTTACTT GCTGGACTCA ACTGCGGCGC CCATCTGTGT GATCTCCCCT GTTTCAAGCT GGGGGGCATA CATTATCGCA CTGATCGGTG GTATTTTGAC TGCCCATGGT TTTGCTGATT CTGGTCACCT GAGTGTGTTT GTACAGATGA TCCCGATGAA CTTCTATGCT GTTTTTGCTC TGTTGCTGCT TCTTTGTGTG GCTTTTATGG GACTCGATGT TGGCCCAATG CGTCAGCATG AGTTGAATGC GCAAAAAGGC AATCTCTATG ATGAGTCAAA AGGCTTACCT CCAGGAGCCA ATTCAGATCT GCCTGAAGCT GACAATGGCA AAATTTTAGG CTTGTTCCTG CCTATCACAG TGCTAGTGGT GGCGACGTTC TACTTTATGG TCAGCAGCGG CAGTGATGCG CTGAGTGCTA AAGGTCTTGA GTTTAGTATT TTAGGTGCAT TTGAAAATAC AGAGGTCGCT TCCTCACTCT TCTTTGGCGC CCTTATTGGT CTTGCTTCAA CGCTTATCTT AGTGATTAGC CAAGGTCTAG ATCGTTCATA CATGTTTAAA GGTTTAGTGA CTGGTGCTCG CTCTATGTTG CCAGCTATCT ATATCCTGTT GTTCGCTTGG ACCATTGCGG GTGTGATTGG TCAGATGGAA ACGGGCAAGT ATATGGCAAG CCTTGCGACT GGTAATATTC CATTTGCGCT GCTTCCAGCA GTGCTATTTA TATTGGCAGG CTTTACTGCA TTCTCAACGG GGACCAGTTG GGGAACCTTC GGGATCATGC TACCAATCGC GGCTGACATG GCGATGGGCA CTCACACCAA TATGATGTTA CCTATGTTGG CATCTGTACT TGCTGGTGCG GTATTTGGTG ACCATTGCTC ACCGATATCG GATACGACAA TTTTGTCCTC TACAGGGGCA AACTGTCACC ATATGGATCA TGTGGTGACA CAGCTCCCTT ATGCCCTAAT CGTGGCTGTG ATCAGCTTGG TTGGTTACAC GGTATTGGGA TTCACTGAGT CTATATTAGC TGGGTTTATC ACCTGTAGTG TGCTGTTTGT GCTTACTGTG ATAGGGCTTA AGATTAAAGT GAATCGCAGA GTAACACCAA ACTAA
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Protein sequence | MTTLSYADSA LSLLPPVVAI LLAIVTRRVL LSLGVGILLG AVLISDFSVG GSGKYLAQQV TGLFWDDGSL NSWNLYLLGF LILLGMITAL ITVSGAAKAF ADWARTKIRN KRDAKLLTMF LGCVVFIDDY FNSLVVGSVA RPLTDRYYIS RSKLAYLLDS TAAPICVISP VSSWGAYIIA LIGGILTAHG FADSGHLSVF VQMIPMNFYA VFALLLLLCV AFMGLDVGPM RQHELNAQKG NLYDESKGLP PGANSDLPEA DNGKILGLFL PITVLVVATF YFMVSSGSDA LSAKGLEFSI LGAFENTEVA SSLFFGALIG LASTLILVIS QGLDRSYMFK GLVTGARSML PAIYILLFAW TIAGVIGQME TGKYMASLAT GNIPFALLPA VLFILAGFTA FSTGTSWGTF GIMLPIAADM AMGTHTNMML PMLASVLAGA VFGDHCSPIS DTTILSSTGA NCHHMDHVVT QLPYALIVAV ISLVGYTVLG FTESILAGFI TCSVLFVLTV IGLKIKVNRR VTPN
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