Gene Swoo_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3227 
Symbol 
ID6117546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3956596 
End bp3957486 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content50% 
IMG OID641634771 
Productpyruvate carboxyltransferase 
Protein accessionYP_001761592 
Protein GI170727566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.461669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0268749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTA ACAAGGTTAG CATTTTTGAG GTGGGTGCCC GTGATGGTCT GCAAAACGAG 
CTGCCAGTCA CCACCCAAGA TAAAATTGCC TTAGTTGAAG CATTAGGCCG AGCAGGTGTT
AAGCGAATAG AAGCCGCCAG CTTTGTATCA CCCAAATGGG TACCACAGAT GGCCGACTCT
GGCGATGTTC TGCGCAATAT TAGTCGCCAA GATGGCGTCA CCTACAGCGC GCTCACACCT
AACTTGAAGG GGCTGGAACT TGCACTTGAC GCTGGTGCCG ATGAAGTTGC CATTTTTGGC
GCCGCCTCCC AGAGCTTTAG TCAGCGTAAT ATCAACTGCT CAATAGAGGA ATCTATTGAG
CGCTTCGCCC CTGTAATGGA GCGGGCTATT GCCGCAAATA TCCCTGTCCG AGGATATGTC
TCTTGCGTGC TAGGTTGCCC CTATGAAGGT GATATTGCCA TCAGTGAAGT CGCACGAGTG
TCTGAGATCC TTTACAAGAT GGGCTGTTAT GAAATATCCC TTGGTGACAC CATAGGTGTT
GGCACGCCAG CCAATGCCCG TAGAATGGTT GAAGCGGTCA GCCAGAAAGT ACCCGTTGAT
AAGCTGGCAC TGCATTTTCA TGATACCTAC GGCCAAGCAC TCGCAAATAT CTTAGCCTGC
TTAGAAACAG GGGTAAGCGT GATCGATTCA TCGGTTGCAG GCCTTGGAGG CTGCCCCTAC
GCCAAAGGTG CATCGGGTAA TTTAGCAACT GAGGATCTTG TTTATATGCT CAATGGATTA
GGTATCGAAA CAGGCATCGA TCTTCATTTG CTGGCTAAAG CGGGTAATAC AATAAGCCAA
GCCTTAGGCA AAAGTACTGG CTCTAAAGTA GCAAGAGCCA TCAGCGGATA A
 
Protein sequence
MTPNKVSIFE VGARDGLQNE LPVTTQDKIA LVEALGRAGV KRIEAASFVS PKWVPQMADS 
GDVLRNISRQ DGVTYSALTP NLKGLELALD AGADEVAIFG AASQSFSQRN INCSIEESIE
RFAPVMERAI AANIPVRGYV SCVLGCPYEG DIAISEVARV SEILYKMGCY EISLGDTIGV
GTPANARRMV EAVSQKVPVD KLALHFHDTY GQALANILAC LETGVSVIDS SVAGLGGCPY
AKGASGNLAT EDLVYMLNGL GIETGIDLHL LAKAGNTISQ ALGKSTGSKV ARAISG