| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3218 |
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| Symbol | |
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| ID | 6117537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3943061 |
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| End bp | 3945334 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634762 |
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| Product | peptidase U32 |
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| Protein accession | YP_001761583 |
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| Protein GI | 170727557 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000467027 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGAA AAATTGAGTT GTTAGCGCCT GGCGGCGATG TTGAAGCAAT TAAGGCCGCC
ATTGTTGCCG GTGCAAACGC AGTCTATTGT GGATTAGATA CCTTTAATGC CCGTAATCGC
GCTGCAAACC TCTCATTTGA CGATCTCTGT GGCATCCTCA GGCTTGCTCA TCAGTTTGAC
TGTGAAGTGT TTCTAACAAT TAATGTGGTG ATATTAGAGC AGGAACTTCC GGCACTCTTT
AAGCTACTCA ATCAATTAGT CAATACCAGC TTAGATGGCA TAATCGTTCA AGATTTAGGC
CTATTTAACC TAGTAAAGAA ATATTTCCCA ACACTGGATA TCCACGCATC GACTCAGCTA
ACCACCCATA ATGAAGGTCA GATCCTATTT CTAAATAAGA TAGGAGCCTC TCGCGTTAAC
CTGTCACGGG AGTTAAATTT ACCCGAGATA GCCTCATTAA CAGCCCTTGC CCACCAGCAC
GATATGCTCA CCGAAGTCTT TGTTCATGGT TCACTGTGTA TCGCTTTCTC CGGCCAGTGT
TACTCCAGTT CAGTCAGTGT TGGAAACTCA GGGAACCGTG GCCGCTGCAG TCAGGCCTGT
CGCGATGAAT ATGAAGAGAC AGCCGCAGGT AATAAATACC CACTGAATTT AAAAGACAAT
TCAGCCTATT TCGACCTCCC AGAGTTGGTT GAGGCTCAGG TTGACTCGCT TAAGATTGAG
GGACGAATTA AAGGCGCTCA TTATGTCTAC ACCGTTGTTG ATAGCTGGCG TAAACAGATA
AATCAGTTTG TCGAAACAGG TAAGTTGCTC GATGATGACT CAAACCTCTA CAAGGTATTC
AATCGCGACT TTACCAACTC CTTTCTCAAA GGCAATCTGA CCAAAGGGAT GTTTATCGAT
AACCCTCGCG ATAACAGTGT TAATCACGCC ATCGAGCAGA AAAATGCGAT CTCAGTGGTA
CAGATCCAAG AGGTGAGACA GAACCTCAGA GCCGATAAAA ATGAGCTAGG CGCCTCCCTT
GAGCAGAAGA TCCAACATCT CAACATCGAT AAGATGCCAT TAACCCTGAC CTTTTCAGGA
ACAGAAGGCT CGCCGTTAAC CATCAAGGCA GGTGTGACAG CGAAATCAAA TCGACTGACA
GAGAACACAG AGTCTAATGA ATTTACCCTA CACTCCGACA CTAAACTGCG AAAGTCAGAC
AAGCCACTTT GTGCCGATGT GCTAGAAAAA CGCTTTAGAA GCTTCAACGA TTCAAACTAT
ATTATCCAAG AATATGACTT TAATCAGCTA GCAGAGAGTT TAAGTATTCC CTTTAAAGAG
CTAACCGCCC TTAAAAACAG GCTGGCATTT TTACTCAATG ACTCAGTTGA AGTGATTGCT
CCTGTCGAGC CACCTAAACT TATTCAAGCT GAAAAAGTAG AAGATTCACC TAAGCTATCT
CTGCTTATCA GTGATGAGAA AGATGCTCAC CTGTGTGATG TTACTAAGGC TGATATCTAC
TTTAAACTGC CTGAGAGCTT TAAAAAGGGC TGTAATAAAT ATATCGAGCT GCTACAACGT
AACCCAAGGT TCATCCCTTG GTTTCCAGCT GTACTTATCG GCAAAGATTA CATTGAAGCG
GTGCGGATCC TTGAGCAGGT CAAACCTAAA CGTATCGTCA GCAATAACAC AGGTGTCGCC
TACAAAGCCT TTGAGATGGG CATTGACTGG ATAGCAGGGC CTTTTCTCAA CACCACTAAC
TCCTATGCTC TACTAACGAT GCAGGAGGAG CTAAACTGCT CCGGCGCGTT TATCTCCAAC
GAGATAAACC GGATGCAGAT CCGCAATATC AAGCGTCCAG CAGGATTTAA ACTGCTCTAC
AGCATCTATC ACCCTATATT GATGATGACA AGCAGACAGT GCTTCTTCCA GCAAACCGTT
GGTTGTAATA AGCCAAGCAT TGAGGATGGC TGTATGCTTA AATGTGAAAA AGCCACCACG
ATTACAAACG TCAAAGGGAT CTCCTTTGCC GTTGATAAAC AAAAAGGCGG TTACCCAAGC
ATCTATAATG ATGAGCAGTT CCTCAACCTT GATGCCATTA AGGATTTCTC AGATCTCTTT
GATGAGTTCT TTATCGATCT GACCGATATC GGTGCTGGCT CTAAAGCTAA GCTCGATAAA
ATCCAGTTGA TTGAACATTT TGAAAACCTG CTTAAGGGTG ACGAAGATGC GGTTTCACTA
CTAAACACTA TGGTGACACT CTCAACTAAC GCCCAATACC AGCAAGGATT GTGA
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| Protein sequence | MSRKIELLAP GGDVEAIKAA IVAGANAVYC GLDTFNARNR AANLSFDDLC GILRLAHQFD
CEVFLTINVV ILEQELPALF KLLNQLVNTS LDGIIVQDLG LFNLVKKYFP TLDIHASTQL
TTHNEGQILF LNKIGASRVN LSRELNLPEI ASLTALAHQH DMLTEVFVHG SLCIAFSGQC
YSSSVSVGNS GNRGRCSQAC RDEYEETAAG NKYPLNLKDN SAYFDLPELV EAQVDSLKIE
GRIKGAHYVY TVVDSWRKQI NQFVETGKLL DDDSNLYKVF NRDFTNSFLK GNLTKGMFID
NPRDNSVNHA IEQKNAISVV QIQEVRQNLR ADKNELGASL EQKIQHLNID KMPLTLTFSG
TEGSPLTIKA GVTAKSNRLT ENTESNEFTL HSDTKLRKSD KPLCADVLEK RFRSFNDSNY
IIQEYDFNQL AESLSIPFKE LTALKNRLAF LLNDSVEVIA PVEPPKLIQA EKVEDSPKLS
LLISDEKDAH LCDVTKADIY FKLPESFKKG CNKYIELLQR NPRFIPWFPA VLIGKDYIEA
VRILEQVKPK RIVSNNTGVA YKAFEMGIDW IAGPFLNTTN SYALLTMQEE LNCSGAFISN
EINRMQIRNI KRPAGFKLLY SIYHPILMMT SRQCFFQQTV GCNKPSIEDG CMLKCEKATT
ITNVKGISFA VDKQKGGYPS IYNDEQFLNL DAIKDFSDLF DEFFIDLTDI GAGSKAKLDK
IQLIEHFENL LKGDEDAVSL LNTMVTLSTN AQYQQGL
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