| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3207 |
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| Symbol | |
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| ID | 6117526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3935120 |
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| End bp | 3935764 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634751 |
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| Product | outer membrane protein W |
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| Protein accession | YP_001761572 |
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| Protein GI | 170727546 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000387398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000173343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGATGAAAA AAAATATCGT TTCTGGTCTA GTTGCCGCCC TACTTTCTGC TGGTTTTGCC
TCTTCTGTTG CTGCTCACCA AGCGGGTGAC ATTATCGTTC GTGCTGGTGC GGTTGTGGTT
GCACCTAATG AGTCAAGCGA GCAGGTTGCG ACTTTCGGCG AGTTTCAGGT GAGTAACAAC
ACTCAGTTAG GCTTGAACTT CGGTTATATG TTAACTGATA ACATAGGTAT CGAGCTGTTG
GCTGCAACAC CATTTAGCCA CGATGTGTCT CTAGCTGGTG TTGGTAAGAT CGCAGAAACT
AAGCAACTGC CACCAACTTT AGTTGCTCAA TACTATTTCG GCTCTGCTAA TTCTAAACTG
CGTCCCTATA TTGGCGCCGG TGTTAACTTC ACCAACTTCT TCGACAACGA ATTCACTAAT
GACCTGGATG GTGCGTTAAC GGATTTAAGC TTGTCTAACT CATGGGGTCT TGCCGCTCAA
GTGGGTATCG ATTACCAAGT TAATAAGAAC TGGCTTGTCA ACGCATCGGT TTGGTATGCA
CAGATTGATA CTGACGTGAA ATTTAATTTA GGCGATGCAC CAGTAACGAT TCAAACTGAT
ATCGACCCAT GGGTTTATAT GGTGAGTGTT GGTTACACTT TCTAA
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| Protein sequence | MMKKNIVSGL VAALLSAGFA SSVAAHQAGD IIVRAGAVVV APNESSEQVA TFGEFQVSNN
TQLGLNFGYM LTDNIGIELL AATPFSHDVS LAGVGKIAET KQLPPTLVAQ YYFGSANSKL
RPYIGAGVNF TNFFDNEFTN DLDGALTDLS LSNSWGLAAQ VGIDYQVNKN WLVNASVWYA
QIDTDVKFNL GDAPVTIQTD IDPWVYMVSV GYTF
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