| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3204 |
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| Symbol | |
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| ID | 6117523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3932613 |
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| End bp | 3933557 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634748 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_001761569 |
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| Protein GI | 170727543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0264716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000200152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCAGTTA AAATTCCCGA CGATCTGCCA GCGGCAGAGA TCTTAGAGTC TGAAAATATT
TTTGTGATGT CTGAAACTCG GGCAGCCAAT CAAGATATTC GTCCTATGAA GGTGCTTATC
TTGAACTTGA TGCCGAATAA GATTGAGACA GAAACTCAGT TATTGAGATT ATTGGGAAAC
ACGCCGCTTC AGGTGGATGT TGATCTGCTT AGGATCCATG ACAAGGAGTC GAAGCACACC
TCCATTGATC ATATGAATAA CTTCTATCGT GATTTTGAAG CGGTGAGGCA GAAAAATTAT
GATGGCTTGA TCATTACTGG CGCACCTTTA GGTCAGATTG AGTTTGAAGA GGTGAGCTAC
TGGGATCATA TTCGAGAGAT CATCGATTGG TCACAGCAGC ATGTCACCTC AGTCTTGTTT
CTGTGCTGGG CCGCTCATGC TGCGCTGTTT CACCTTTACG GCTTAAACCG TAACTTACTT
GAGCAGAAAC GCTCGGGGGT TTTTGTTCAT CGCCGTACCA CTCAGCATTT TCCTCTTCTT
AGGGGGTTTG ATGATGAATT TTTAGCACCA CACTCTCGCT TTGCCGAGAT GAGTCTTGAG
CAGCTTAAAG CGCATCCAGA ACTACAAGTG CTCACTGAAT CCGATACAGC AGGGGCATAT
ATGGTGCTGA GCCGGAATAA TCGTAATCTG TTTGTGATGG GCCATCCTGA ATATCAAAAA
TCAACGCTAA AAGATGAGTA CCACAGAGAT CTAGAGCAGG GACTCAACCC TGATGTGCCA
CAAAACTACT TTAGAGATGA TAACCCTGAG AAGGAGCCTG TCGCACGTTG GCATGGCCAC
GGCAGCCTAT TGGTCAGTAA CTGGCTCAAC TATTATGTTT ACCAGCTAAC CCCCTATAAT
CTGGATGACA TGAGTGGCAT CACTCCCTGG GAGAATAAGC AATAA
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| Protein sequence | MPVKIPDDLP AAEILESENI FVMSETRAAN QDIRPMKVLI LNLMPNKIET ETQLLRLLGN
TPLQVDVDLL RIHDKESKHT SIDHMNNFYR DFEAVRQKNY DGLIITGAPL GQIEFEEVSY
WDHIREIIDW SQQHVTSVLF LCWAAHAALF HLYGLNRNLL EQKRSGVFVH RRTTQHFPLL
RGFDDEFLAP HSRFAEMSLE QLKAHPELQV LTESDTAGAY MVLSRNNRNL FVMGHPEYQK
STLKDEYHRD LEQGLNPDVP QNYFRDDNPE KEPVARWHGH GSLLVSNWLN YYVYQLTPYN
LDDMSGITPW ENKQ
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