Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3175 |
Symbol | |
ID | 6117494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3899417 |
End bp | 3899824 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634720 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001761541 |
Protein GI | 170727515 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC CGCTATATTC ATTGCTCTTG ATGGGGGCAT TCTCCGCTAC TGCTGCTACC TCTAAAGATC TGATCAAGTC TACAGAGACT TGGGATGGAC AAACATTACC GCAATATTCA CTAGTTCAAC CTGAGGTGAC GATTAAAGAG ATAGTGATTG CGCCAGGTGA GCAGCTGCCT TGGCATCAGC ATCCTGCGAT AAATGCCGGC ATACTGCTTA GTGGTGAGTT AATTGTGTAT ACACGCGATG GTAAGGAGAA AAACCTGAAA GCTGGCGAGC CGCTTATTGA GCTGTTCAAT ACCTCTCATT ACGGGAAAAA TATCAGCAGT GAGCCAGCTA AAATTGTGGT GTTTTATCTG GCGGAAAAAG ATGCTGCAGT CACAGTACTG GATAAAGAGG CTGAATAA
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Protein sequence | MLKPLYSLLL MGAFSATAAT SKDLIKSTET WDGQTLPQYS LVQPEVTIKE IVIAPGEQLP WHQHPAINAG ILLSGELIVY TRDGKEKNLK AGEPLIELFN TSHYGKNISS EPAKIVVFYL AEKDAAVTVL DKEAE
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