Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3158 |
Symbol | |
ID | 6117477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3873615 |
End bp | 3874508 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634703 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001761524 |
Protein GI | 170727498 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGACA CTCTGTTCCC CTTCAAACGT AACTATCTCT ATAGAGATGG GCATAAACTG CAATATGTTA ATGAGGGAGA AGGTGAGCCG GTCGTTATGG TTCATGGAAA CCCAAGTTGG TCATTTTACT ATCGCAATGT AGTCACTGCA CTTAGCGGTA AGCATCAATG TATTGTTCCT GATCATATCG GTTGCGGTTT GTCGGATAAG CCCGATGATA GCGGCTATGA TTACACGTTA AAAAACCGTA TTGACGATCT CGAAGCTCTG CTCGATCACC TTAATGTCAA AGAGAATATC ACCTTAGTGG TTCATGATTG GGGCGGGATG ATAGGGATGG GTTATGCAGC CCGTTACCCT GAGCGTATTA AACGCCTTGT GGTGTTAAAT ACGGGCGCCT TTCATCTGCC TGAGTCAAAA CCATTTCCTT GGCCCCTGTG GATCTGTCGT AATACCCTGT TAGGAACGGC TTTGGTTCGT GGTTTTAACG CTTTCTCATC TATCGCCTCC TATGTCGGGG TTAAGCGTAA ACCTATGCCT GCTGAGATCC GTAAGGCCTA TGTCGCGCCA TTTAACTCTT GGGCTAACCG CATCTCGACG TTAAGGTTTG TGCAAGATAT TCCGCTTAAG CCAGGTGACA GAAACTATGA GTTAGTATCT GAGATTGCCG CGAGTTTACC TAAATTTGCT AACGTGCCGA CACTGATCTG CTGGGGTATT AAAGATTTTG TTTTTGATAA ACATTTCTTA GCTCAGTGGA AAGTGGAGAT GCCTCACGCT ACCGTACATG AGTTTGCTGA TTGTGGTCAC TATATTTTAG AAGATGCAAG TGAAGAGGTC GTTGGGCATA TTAGCGACTT TATCTCAAAT GACTCGCTTA TTGCTAATAG CTAG
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Protein sequence | MLDTLFPFKR NYLYRDGHKL QYVNEGEGEP VVMVHGNPSW SFYYRNVVTA LSGKHQCIVP DHIGCGLSDK PDDSGYDYTL KNRIDDLEAL LDHLNVKENI TLVVHDWGGM IGMGYAARYP ERIKRLVVLN TGAFHLPESK PFPWPLWICR NTLLGTALVR GFNAFSSIAS YVGVKRKPMP AEIRKAYVAP FNSWANRIST LRFVQDIPLK PGDRNYELVS EIAASLPKFA NVPTLICWGI KDFVFDKHFL AQWKVEMPHA TVHEFADCGH YILEDASEEV VGHISDFISN DSLIANS
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