Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3149 |
Symbol | |
ID | 6117468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3856305 |
End bp | 3857597 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634694 |
Product | putative serine transporter |
Protein accession | YP_001761515 |
Protein GI | 170727489 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTG TAATTAGCAA AACTGAAACC GCCTCGACAC AAATCGAAGT CAAATCAAGC TGGAGTAAAA GTGATACCCT ATGGGTATTA GGGCTTTATG GAACAGCAGT AGGTGCTGGC ACTCTTTTTC TTCCCATTAA CGCAGCACAA GGTGGTTTAA TACCACTGAT AATGATGGCC CTTCTTGCAC TCCCTATGAC CTTCTTCGCC CATCAGGGGA TGACACGATT TGTGTTATCA GGGTCTAAGC CAGGAGCTGG GATCACAGAG GTGGTTGAGG AGCATTTTGG TGTTGGCATG GGTAAGGTTA TCACCTTGCT TTACTTCTTT GCAATCTACC CCATTCTATT AGTCTACAGT GTCGCACTAA CCAACACTGT TGAGAGTTTT CTGCTGCACC AGCTAAATAT CACCCCACCT AACCGTGCGA CTTTAGCTTT AGTCTTGATC ATAGCCTTGA TTGCAGTGGT GCGCTTAGGA GAGCAGTTAA TCATCAAGGC GATGAGTGTA TTGGTATTCC CCTTTGTCGC TGTACTTCTG ATGCTCTCTT TCTATTTAAT TCCTTACTGG AACACGGCAA TCTTTAATAA CATCGTGCCT GCAGAGGGAG GGATCAGCAC TATCGTCATG GCTCTGTGGC TAATTCTGCC TGTGATGGTC TTTTCATTTA ATCACTCGCC GGTTATCTCC TCCTTCGCCG TCGATCGCAA AAAAGCACAT GGTGATAATG CTGAAAAGCA GTGTTCACGA ATTCTAGCTA TGAGCCATAT TCTCATGGTC GCCACTGTGA TGTTTTTTGT CTTTAGCTGT GTACTAAGCC TCTCTCCTGC AAATTTGGCA GAAGCAAAGG CACAAAATGT GTCGATATTA ACCTATTTGG CAAATCACTT TAATACACCA ATTATCGCCT ATGCCGCGCC TATAGTAGCA ATAATAGCTA TCACGAAGTC GTTCTTCGGT CACTATATTG GTGCCAGTGA AGGTTTTAAT GGCTTAATAA TTAAATCTGC ACGTAGCAGG AAGAAGGAGA TCAGTTCAGT CACCTTAAAT CGTTTTACGA CTGCCTTTAT GCTGCTAACA ACCTGGGCTG TAGCCACAAT TAATCCCAAT ATCTTAGGCA TGATCGAAAG CTTAGGCGGT CCGATTATCG CACTACTACT TTTTATAATG CCTATGTATG CCATCAAAAA AGTACCAGCA ATGAAGCAGT ATTCAGGTCA ATTAAGTAAT TTTTTCGTCG TTATTATCGG GCTAATTTCG ATATCGGCAA TCTTCTACTC TCTTGTTCAG TAA
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Protein sequence | MDTVISKTET ASTQIEVKSS WSKSDTLWVL GLYGTAVGAG TLFLPINAAQ GGLIPLIMMA LLALPMTFFA HQGMTRFVLS GSKPGAGITE VVEEHFGVGM GKVITLLYFF AIYPILLVYS VALTNTVESF LLHQLNITPP NRATLALVLI IALIAVVRLG EQLIIKAMSV LVFPFVAVLL MLSFYLIPYW NTAIFNNIVP AEGGISTIVM ALWLILPVMV FSFNHSPVIS SFAVDRKKAH GDNAEKQCSR ILAMSHILMV ATVMFFVFSC VLSLSPANLA EAKAQNVSIL TYLANHFNTP IIAYAAPIVA IIAITKSFFG HYIGASEGFN GLIIKSARSR KKEISSVTLN RFTTAFMLLT TWAVATINPN ILGMIESLGG PIIALLLFIM PMYAIKKVPA MKQYSGQLSN FFVVIIGLIS ISAIFYSLVQ
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