Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3121 |
Symbol | |
ID | 6117440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3822853 |
End bp | 3824523 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634666 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_001761487 |
Protein GI | 170727461 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000496067 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTCATC TGGACAGCGA AGTTCGTCCT AGTAACTTCA TTCGTAATAT CATAGATGAA GATCTTGAAA GCGGTAAGCA TGAGAGTGTG CATACCCGTT TTCCACCTGA GCCTAATGGC TTTCTTCATA TCGGCCATGC AAAATCTATC TGCTTAAACT TCGGTATAGC AAAGGATTAC AAGGGCCAAT GTAACTTACG TTTCGATGAC ACGAATCCTG AGAAAGAAGA TATCGATTAT GTTCATTCTA TTCAGGATGA TGTGAAGTGG CTTGGTTTTG ACTGGGATGG CGATATTCGC TACTCATCAA ACTATTTTGA CCAGTTACAT AAGTATGCGA TTGAGTTGAT CGAGAAAGGC TTAGCCTATG TCTGTTTCCT TAATGGGGAA GAGACTCGCG AGTATCGCGG CACACTTAAA GCGCCTGGAA AGAACAGTCC TTATCGTGAC ACATCAGTAG CTGAGAACCT CGAGCTATTT GAAAAGATGC GTAAAGGTGA GTTCAAAGAG GGAGAGTGTT CTCTTCGAGC TAAAATCGAC ATGGCATCAT CATTTATGTG CATGCGTGAT CCGATAATCT ATCGTGTCCG TTTTGCTCAT CACCATCAAA CTGGTGATAA GTGGTGTATC TATCCTATGT ACGATTTTAC TCACTGTATC TCAGATGCGA TTGAGAACAT CAGTCACTCA CTTTGTACAT TAGAGTTTCA GGATAATCGC CGTTTGTATG ATTGGGTATT GGATCACTTA GATGATTTCC AAGCGCCAAA TCGTACTCGT CAGTATGAGT TTTCTCGTCT AAACCTAGAG TACACCTTGA TGTCTAAGCG TAAGCTTAAC GATCTTGTGA CTCGTAAATT GGTTAATGGC TGGGATGACC CACGTATGCC GACCATTGCA GCGCTTCGTC GCCGTGGTTA TACGCCGTCG GCTATCCGTG AGTTCTGTTT ACGCATTGGC GTAACTAAGC AGGACAACAT GGTAGAAGTT GGAATGTTAG ATGCGTGTAT CCGTGAGGAG CTTAATGACA AAGCGCCTCG TGCAATGGCT GTGATCAACC CTGTTAAGGT GATAATCGAG AACTACCCAG AAGGTCAAAT TGAAACCTTG AGCGCACCAA TACACCCAAC TAATGAAGAG ATGGGCAAGC GTGAATTGGC TTTTGGTCGT GAACTTTATA TCGATGCTGA TGACTTCCGT GAAGAAGCGA ATAAGAAGTA CAAGCGTCTG GTTCAAGGCA AAGAGGTGCG TTTACGTAAC GCTTATGTCA TTAAAGCAGA GCGTTGTGAT AAAGATGCCG ATGGCAATGT CACTACTATC TACTGTAGCT ATGATGATGA GACGCTAGGT AAGAATCCAT CAGATGGGCG TAAAGTAAAA GGGGTTATCC ATTGGGTTGA AGCAACATCT GCTAAACCTG CAGAGTTCCG CCTTTACGAT CGTCTGTTTA CCGATGCTAA CCCAGCGGCT GCTGAGACTG TCGATGAGGT ACTTAACCCA GACTCTCTGG TTGTAGCTCA TGGTTTCGTT GAAGCAGGTC TTGTGGCTGC AGAAGCTGAA AAAGCATATC AGTTTGAGCG TGAAGGCTAC TTCTGTGCAG ACAATAAAGA TTCAACACCA GAAAACTTGG TATTCAATCT AACCGTTGCA TTACGAGACT CTTCTCAGTA A
|
Protein sequence | MSHLDSEVRP SNFIRNIIDE DLESGKHESV HTRFPPEPNG FLHIGHAKSI CLNFGIAKDY KGQCNLRFDD TNPEKEDIDY VHSIQDDVKW LGFDWDGDIR YSSNYFDQLH KYAIELIEKG LAYVCFLNGE ETREYRGTLK APGKNSPYRD TSVAENLELF EKMRKGEFKE GECSLRAKID MASSFMCMRD PIIYRVRFAH HHQTGDKWCI YPMYDFTHCI SDAIENISHS LCTLEFQDNR RLYDWVLDHL DDFQAPNRTR QYEFSRLNLE YTLMSKRKLN DLVTRKLVNG WDDPRMPTIA ALRRRGYTPS AIREFCLRIG VTKQDNMVEV GMLDACIREE LNDKAPRAMA VINPVKVIIE NYPEGQIETL SAPIHPTNEE MGKRELAFGR ELYIDADDFR EEANKKYKRL VQGKEVRLRN AYVIKAERCD KDADGNVTTI YCSYDDETLG KNPSDGRKVK GVIHWVEATS AKPAEFRLYD RLFTDANPAA AETVDEVLNP DSLVVAHGFV EAGLVAAEAE KAYQFEREGY FCADNKDSTP ENLVFNLTVA LRDSSQ
|
| |