| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3117 |
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| Symbol | |
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| ID | 6117436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3819677 |
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| End bp | 3820177 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634662 |
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| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
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| Protein accession | YP_001761483 |
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| Protein GI | 170727457 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0738443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000265344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGATCACTC TTCATACTAA TCACGGTGAG ATCGTTTTAA AACTTGACGC AGAAAAAGCG
CCAATTACCG CAGAAAACTT CACCAAGTAC GTTAAAGATG GCTTCTTTGA TGGCACTGTT
TTCCACCGTG TCATTGACGG TTTCATGATC CAAGGTGGCG GTTTCACTGA AGATATGGTC
CAAAAGAACA GTGGCGAAAC CATCAAGAAC GAAGCTAATA ACGGTTTATC AAACCTAGTT
GGCACTATCG CGATGGCAAG AACCTCTGAT CCTCATTCAG CAACAGCTCA GTTCTTCATC
AACATCAACG ACAACACTTT CCTTGATTTT AAGTCTGAAA CCTCTCAAGG TTGGGGTTAC
TGCGTATTTG GTAAAGTGAC AGCTGGTATG GATGTCGTCA ATAAAATTAA AGCGGTTAGC
ACAGGCAACC GTGGCATGCA TCAAGATGTG CCTCTTGAAG CAGTTATCAT TGAAAAAGTA
ACCATTGCTG ACGCTGAATA A
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| Protein sequence | MITLHTNHGE IVLKLDAEKA PITAENFTKY VKDGFFDGTV FHRVIDGFMI QGGGFTEDMV
QKNSGETIKN EANNGLSNLV GTIAMARTSD PHSATAQFFI NINDNTFLDF KSETSQGWGY
CVFGKVTAGM DVVNKIKAVS TGNRGMHQDV PLEAVIIEKV TIADAE
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