| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3116 |
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| Symbol | cysS |
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| ID | 6117435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3818053 |
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| End bp | 3819432 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634661 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_001761482 |
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| Protein GI | 170727456 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000569576 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000405781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTTGAAGC TATACAACAG CCTGACCCGC CAAAAAGAGG AATTTAAACC ATTACAGCCA
GGTAAAGTTG GCATGTATGT GTGTGGGATC ACCATCTATG ATTTATGTCA TATTGGTCAC
GGGCGTACCT TTGTAGCTTT CGACATGATA GTAAGGTACC TACGCTATTC TGGTTACGAT
GTGAATTTTC TGCGTAACAT TACTGATGTT GATGACAAGA TCATCAAGCG TGCGGCAGAA
AACAAGGAGA GCTGTGATTC ACTGACAGAG CGTTTGATCG GTGAAATGCA TAAAGATTTC
GACTCGTTAA ACATGAAGCG TCCCGATTTT GAGCCTAGAG CAACGTTGCA CATGGCTGAG
ATTATCGAGA TGGTTGAAAA GCTTATTGAG AAAGAGCACG CCTATGTGTC ATCCAATGGT
GATGTGTTGT TTAGTGTCTC TTCATTCCCT GAGTATGGTC GTTTGTCTGG ACAAAATTTA
GAGCAACTAC AGGCCGGAGC TCGTGTCGAA GTCGAAGACT CCAAGCGCGA TCCTATGGAT
TTCGTACTGT GGAAGATGTC AAAACCAGGT GAGCCGACTT GGGAGTCTCC ATGGGGACCT
GGTCGTCCAG GTTGGCATAT CGAGTGTTCA GCCATGAACA GCAAGCATCT TGGCCAACAT
TTTGATATTC ATGGTGGTGG TAGCGATCTT CAGTTCCCTC ATCATGAAAA TGAGATCGCA
CAATCTTGCT GCGCCCATAA TACGCCTTAT GTGAACTACT GGATGCACAC AGGCATGGTG
ATGGTCGATA AAGAGAAGAT GTCTAAGTCT CTTAATAACT TCTTCACTAT CCGAGATGTA
TTAGCTCATT ATGATGCGGC GACAATTCGT TACTTCTTGT TGTCTGGTCA CTACCGTAGC
CAACTTAACT ACTCAGAAGA TAACCTTAAG CAAGCTAAAT CTGCATTAGC ACGTCTGTAC
ACGGCACTAA AAGATCTGGA TTTAACTGTT GAGCCTGCGG CGGCTGAAAA CTTTGTGTCT
AAGTTTAAAC AGGCGATGGA TGATGACTTT AATACGCCTG AAGCATATTC AGTATTGTTT
GATATGGTGC GTGAGGTTAA CCGTCTTAAA GTCACTGATT TAGCTCAAGC TTCGGCTCTC
GCAGTGCGTC TAAAAGAGTT GGCTGGTGTA CTTGGTATAC TCGAGCAAGA TGTCGATAGC
TTCTTTAAAG GCGAGAGTAA CGATGCTGAA GTCGCTGAGG TTGAAGCATT AATCGCAGAG
CGTAATCGAG CACGAGCTGA GAAAGATTGG CCTGCTGCGG ATATCGCCCG TGATGGACTT
AACGCCTTAG GTGTGATTTT GGAAGATGGC CCTGAAGGGA CAACGTGGCG TAAGAAGTAA
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| Protein sequence | MLKLYNSLTR QKEEFKPLQP GKVGMYVCGI TIYDLCHIGH GRTFVAFDMI VRYLRYSGYD
VNFLRNITDV DDKIIKRAAE NKESCDSLTE RLIGEMHKDF DSLNMKRPDF EPRATLHMAE
IIEMVEKLIE KEHAYVSSNG DVLFSVSSFP EYGRLSGQNL EQLQAGARVE VEDSKRDPMD
FVLWKMSKPG EPTWESPWGP GRPGWHIECS AMNSKHLGQH FDIHGGGSDL QFPHHENEIA
QSCCAHNTPY VNYWMHTGMV MVDKEKMSKS LNNFFTIRDV LAHYDAATIR YFLLSGHYRS
QLNYSEDNLK QAKSALARLY TALKDLDLTV EPAAAENFVS KFKQAMDDDF NTPEAYSVLF
DMVREVNRLK VTDLAQASAL AVRLKELAGV LGILEQDVDS FFKGESNDAE VAEVEALIAE
RNRARAEKDW PAADIARDGL NALGVILEDG PEGTTWRKK
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