| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3115 |
|---|
| Symbol | |
|---|
| ID | 6117434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3817076 |
|---|
| End bp | 3817936 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641634660 |
|---|
| Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_001761481 |
|---|
| Protein GI | 170727455 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000143268 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000300932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTC AAACAATCGA TGGAAAAGCC ATTGCACAGT CCATTCGAAC ACAACTCAAA
GAAAAAGTGA CAGCCCGTAA AGAGGCTGGT AAAAGAGTCC CAGGTTTAGC CGTTATCTTA
GTCGGTGCCG ATCCAGCCTC ACAGGTCTAT GTAGGTAGTA AGCGCCGCGC CTGTGAAGAG
GTAGGTTTTT TATCTCGCTC CTATGATCTC GAATCCAGCA CCACTGAAGA GCAACTGCTC
TCACTCATCG ATGAGTGTAA CCAAGATCCA GCAATTGATG GGATCTTGGT GCAATTGCCG
CTTCCTGAGC ATATTGAAGA GTCAAAAGTG ATTGAGCGTA TCCGTCCCGA TAAAGATGTT
GACGGTTTCC ACCCCTATAA TGTGGGTCGA CTTGCACAGC GTATCCCAGT TTTACGCTCA
TGCACGCCAA TGGGGATCAT GACCCTGATA AAATCGACTG GCGTCGACAC TTATGGCTTG
GATGCGCTTG TAGTAGGTGC ATCAAATATC GTTGGCCGCC CGATGAGCCT TGAGCTACTG
CTTGCGGGTT GTACAACCAC AACTTGCCAC CGTTTTACCC GTAACCTTGA GCAAAAAGTA
AGACAAGCCG ATCTGGTCGT TGTCGCTGTC GGTAAGCCAG GCTTTATTCC TGGCGAGTGG
ATAAAACCCG GCGCTTTAGT CATTGATGTT GGTATCAACC GCCTCGAAGA TGGCAGTTTA
GTAGGCGATG TTCAATATGA TGTTGCCGCT CAAAATGCCA GCTTTATTAC CCCAGTTCCC
GGTGGTGTCG GCCCTATGAC CATCGCGAGT CTGTTAGAGA ATACTCTCTA TGCAGCTGAG
CAGTATCACG ATGAAGCTTA A
|
|---|
| Protein sequence | MTAQTIDGKA IAQSIRTQLK EKVTARKEAG KRVPGLAVIL VGADPASQVY VGSKRRACEE
VGFLSRSYDL ESSTTEEQLL SLIDECNQDP AIDGILVQLP LPEHIEESKV IERIRPDKDV
DGFHPYNVGR LAQRIPVLRS CTPMGIMTLI KSTGVDTYGL DALVVGASNI VGRPMSLELL
LAGCTTTTCH RFTRNLEQKV RQADLVVVAV GKPGFIPGEW IKPGALVIDV GINRLEDGSL
VGDVQYDVAA QNASFITPVP GGVGPMTIAS LLENTLYAAE QYHDEA
|
|---|
| |