| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3114 |
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| Symbol | tig |
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| ID | 6117430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3814650 |
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| End bp | 3815954 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634656 |
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| Product | trigger factor |
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| Protein accession | YP_001761480 |
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| Protein GI | 170727454 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000617295 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000421874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAGTTT CTGTTGAAAC AACACAAGGC CTAGAGCGCC GTCTGACCAT CTCTGTTCCT
GCAGAGCAGA TTGAGAAAGC TGTAAACGAT AGTTTAAAAA ACGAAGCTAA GCGTGCTCGT
ATTCCTGGTT TTCGCCCAGG AAAAGTACCT GTAAGTGTCA TCAACAAGCG TTATGGAAAA
GCTATTCGTC AAGATATCAC TGGCGAAGTC ATGCAACGTA ATTTCGTTGA AGCTATCATC
GCTGAGAAAT TGAACCCAGC TGGTGCGCCA ACTTTCGTTC CTGGCGAATC AGATGCTGAG
AACTTCCAGT TTGTAGCAAC TTTCGAAATC TACCCAGAAG TAGAGTTGAA AGGTCTAGAA
GATATTGCTG TTGAGCAACC AACTTCAGAT GTTACCGATG CTGATGTCGA CACTATGATC
GAAACACTAC GTAAGCAACA CGCTACTTAT GAAGCTGTTG AACGTGCTGC TGCCGATGGC
GACAAAGCTA AAATCAACTT TGTTGGTTCT ATCGATGGTG AAGAGTTCGA AGGCGGAAAA
GCTGAAGATT TCGAACTTCA ACTAGGTTCT GGCCGTATGA TCCCTGGTTT TGAATCAGGC
GTTGAAGGTC ATAAAGCAGG TGAAGAGTTC GATATCGAAG TTACTTTCCC TGAAGATTAC
CACGCTGAAA ACCTAAAGGG TAAAGTTGCT AAGTTCGCTA TTACTTTGAA TGAAGTACAA
GCGGCTAACC TACCTGAAGT GAACGATGAG TTCGCTACAC TTTTCGGTGT CGCTGAAGGT
GGCCTAGAAG CACTTAAAGC TGAGATCAGC AAGAACATGG GTCGTGAACT TGAGCAAGCG
CTTAAAGCAA ATGTGAAAGA GCAAGTACTT AATGGTCTGC TAGAGCAGAA CGAGATTGAG
CTTCCTGCTT CTCTAATTGC TGGTGAAGTT GAAGTGCTAC GTAAGCAAGC TATGCAACGC
TTCGGTGACC AAGCTGCCAA CATGCCAGAA CTTCCAGCTG ATTTATTTAC TGAACAAGCT
GAACGTCGCG TAAAAGTTGG TCTATTATTG GGTGAAGTCA TCAAGACTAA CGAGCTGAAA
GCTGAAGAAG AGCGAGTTCA AGGACTTATC GCTTCTATGG CTTCTGCATA CGAAGATCCA
AGTGAAGTTG TTGAATATTA CAATGGCAAC CAAGAGATGA TGCAGAACAT GCGTAATGTC
GCTCTTGAGG AACAAGCCGT TGAAGCATTG TTAAAAACTG CAAAAGTGAC TGAGAAAGCA
GTCAACTTTG AAGAATTTAT GAACAAGGCT ACTCAACAAG GTTAA
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| Protein sequence | MQVSVETTQG LERRLTISVP AEQIEKAVND SLKNEAKRAR IPGFRPGKVP VSVINKRYGK
AIRQDITGEV MQRNFVEAII AEKLNPAGAP TFVPGESDAE NFQFVATFEI YPEVELKGLE
DIAVEQPTSD VTDADVDTMI ETLRKQHATY EAVERAAADG DKAKINFVGS IDGEEFEGGK
AEDFELQLGS GRMIPGFESG VEGHKAGEEF DIEVTFPEDY HAENLKGKVA KFAITLNEVQ
AANLPEVNDE FATLFGVAEG GLEALKAEIS KNMGRELEQA LKANVKEQVL NGLLEQNEIE
LPASLIAGEV EVLRKQAMQR FGDQAANMPE LPADLFTEQA ERRVKVGLLL GEVIKTNELK
AEEERVQGLI ASMASAYEDP SEVVEYYNGN QEMMQNMRNV ALEEQAVEAL LKTAKVTEKA
VNFEEFMNKA TQQG
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