| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3111 |
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| Symbol | |
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| ID | 6117427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3810082 |
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| End bp | 3812439 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634653 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001761477 |
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| Protein GI | 170727451 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000302601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000706703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAAG AGAGTGAAGC GCGAATCGAA CTACCCGTAT TGCCACTAAG AGATGTGGTG
GTGTATCCCC ATATGGTAAT TCCGTTGTTC GTTGGACGGG AAAAGTCAAT CCGTTGCCTA
GAAACGGCGA TGGAACAAGA CAAGCAGATC ATTTTAGTCG CTCAGCGTGA TGCTGAGCTT
GACGACCCAA CTACAGATGA CATCTTTGAG GTTGGTACAG TTGCCTCAAT TTTGCAGTTA
CTTAAACTAC CTGACGGCAC AGTAAAGGTG TTGGTCGAAG GTGGCAAACG TGCTCGTATT
GAGAAGTACA CCGACGAAGA GTCCTTCTTT GTCGCTCAGG CTCATTACCT TGAATCAGAC
CCTATGGCTG AGAAAGAGGA GGAGGTACTG GTACGCTCTG CTGTGGGACA GTTTGAAGGC
TATATCAAGC TCAATAAGAA GATCCCACCT GAGGTGTTGA CCTCTTTATC TGGTATCGAT
GAAGCGCCAC GTCTAGCAGA CACCATGGCT GCTCACATGC CGCTGAAGCT TGAAGACAAG
CAATCTGTGC TTGAGATGGT GGATGTTGCT GAACGTCTGG AATATTTAAT GGCGATGATG
GAGTCTGAGA TTGACCTATT GCAGGTTGAG AAGCGGATCC GTTCACGTGT TAAAAAGCAG
ATGGAGAAGA GTCAGCGCGA GTACTACCTT AATGAGCAGA TGAAGGCGAT TCAGAAGGAG
CTCGGCGATA TCGACGAGTC TCATGATGAA TTTGAGAGCC TAGCGAAGAA GATAGATGAA
GCTAAAATGC CGGAAGAGGC TAAAGAAAAA GCCACTGCTG AGCTAAATAA GTTAAAGATG
ATGTCGCCAA TGTCGGCAGA AGCTACGGTA GTACGTAGCT ACGTTGATTG GATGGTCTCT
GTGCCTTGGT ATCAGCGCTC TAAAATCAAA CGTGACTTGG CTAAGGCGCA AGATGTTCTC
GATACCGATC ATTTCGGACT AGAGAAGGTT AAAGAGCGCA TCTTAGAGTA CCTAGCGGTT
CAGAGTCGTG TTAAGCAGCT TAAAGGCCCT ATCTTGTGCT TAGTTGGACC ACCGGGTGTA
GGTAAAACGT CACTTGGTCA ATCTATTGCG AAAGCTACGG GACGTAAGTA TGTCCGTGTC
GCTTTAGGTG GTGTGCGTGA TGAAGCGGAG ATCCGCGGTC ATCGACGTAC CTACATTGGC
TCAATGCCTG GTAAAGTTAT CCAGAAGATG TCGAAAGTTG GGGTTAAAAA CCCACTATTC
CTGCTCGACG AGATCGATAA GATGAGCAGT GATATGCGTG GCGACCCAGC ATCTGCATTG
CTTGAAGTGT TAGATCCTGA GCAGAATGCA AGTTTCAGCG ATCACTATTT AGAGGTTGAT
TATGATCTCT CTGATGTGAT GTTCGTTGCA ACCTCTAACT CGATGAATAT TCCAGGCCCA
CTGCTGGACC GTATGGAGGT GATTCGCCTC TCCGGTTACA CAGAAGATGA AAAGCTTAAC
ATCGCTAAGC AGCATTTACT GCAGAAGCAG ATTGAGCGAA ATGGACTCAA GCCAAAAGAG
GTGACAGTTC ACGATAGTGC CATTATCGGT ATTATTCGTT ACTACACTCG TGAAGCCGGT
GTGCGAGCGC TTGAGCGTGA ACTCTCTAAG ATCTGCCGTA AGGTGGTTAA GCAGATTTTA
CTGGATAAGA GCGTGAAACA TATTGAAGTG ACGCAAGATA ACTTGAAGTC CTTCTTAGGG
GTTCAGCGCT GCGATTATGG TAAAGCGGAA TCTAATAACC AAATCGGTCA AGTCACAGGC
CTTGCCTGGA CCGAAGTGGG TGGCGATCTG TTAACCATAG AAGCGACCTC TGTACCTGGA
AAAGGAAAGC TAAGCTACAC AGGCTCACTA GGTGATGTGA TGCAGGAGTC GATTCAAGCG
GCAATGACTG TGGTTAGAGC TCGTGCTGAA CAGCTAGGTA TCAATCCAGA TTTTTACGAG
AAACGTGATA TCCATGTACA CGTTCCTGAA GGAGCAACAC CTAAAGATGG CCCTTCAGCT
GGTGCGGCAA TGTGTACCGC CTTGGTGTCG AGTTTAACGG GTAATCCTGT TCGCGCCGAT
GTCGCCATGA CAGGTGAAAT TACTCTGCGT GGTGAGGTAC TTCCTATTGG TGGCTTGAAG
GAGAAATTAC TTGCAGCTCA CCGTGGAGGC ACAAAAGTTG TCTTAATTCC GCAAGAAAAC
GAGCGTGATC TGGAGGAAAT TCCGGCAAAT GTGGTTGCCG ATCTTGAAAT TCATCCGGTG
CGTTGGGTTG ACGAAGTGCT TAAATTGGCG TTAGAACGAC CAATTGAAGG CTTTGAAATC
GTGAAAAACT TGGGTTAA
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| Protein sequence | MTQESEARIE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL ETAMEQDKQI ILVAQRDAEL
DDPTTDDIFE VGTVASILQL LKLPDGTVKV LVEGGKRARI EKYTDEESFF VAQAHYLESD
PMAEKEEEVL VRSAVGQFEG YIKLNKKIPP EVLTSLSGID EAPRLADTMA AHMPLKLEDK
QSVLEMVDVA ERLEYLMAMM ESEIDLLQVE KRIRSRVKKQ MEKSQREYYL NEQMKAIQKE
LGDIDESHDE FESLAKKIDE AKMPEEAKEK ATAELNKLKM MSPMSAEATV VRSYVDWMVS
VPWYQRSKIK RDLAKAQDVL DTDHFGLEKV KERILEYLAV QSRVKQLKGP ILCLVGPPGV
GKTSLGQSIA KATGRKYVRV ALGGVRDEAE IRGHRRTYIG SMPGKVIQKM SKVGVKNPLF
LLDEIDKMSS DMRGDPASAL LEVLDPEQNA SFSDHYLEVD YDLSDVMFVA TSNSMNIPGP
LLDRMEVIRL SGYTEDEKLN IAKQHLLQKQ IERNGLKPKE VTVHDSAIIG IIRYYTREAG
VRALERELSK ICRKVVKQIL LDKSVKHIEV TQDNLKSFLG VQRCDYGKAE SNNQIGQVTG
LAWTEVGGDL LTIEATSVPG KGKLSYTGSL GDVMQESIQA AMTVVRARAE QLGINPDFYE
KRDIHVHVPE GATPKDGPSA GAAMCTALVS SLTGNPVRAD VAMTGEITLR GEVLPIGGLK
EKLLAAHRGG TKVVLIPQEN ERDLEEIPAN VVADLEIHPV RWVDEVLKLA LERPIEGFEI
VKNLG
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