| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3093 |
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| Symbol | |
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| ID | 6117409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3790824 |
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| End bp | 3791147 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641634635 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001761459 |
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| Protein GI | 170727433 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000182901 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAATC ACATTACTAT TGTTGGTTTA CTGTTTCTTG CATCTGTTTC ATTGGGCGTT
AATGCAGGCC AGAAGCCTAA AGCCACACCG ACACCTGTTG AAAACTCAGC GACTCAAGCC
CAAGCTCAAT CCCTTAGTAT TAATATTAAT ACGGCGCAGG TGGCAGATCT TGTTCGCTTA
AAAGGGATTG GAGAAGCAAA AGCTAAGGCT ATCATTGAAT TTCGCCAAGC CAATGGCAAC
TTTAAAGCGG TTAAAGAGCT TGAACAGGTG AAAGGGATTG GCGCCAAACT GGTTGAGAAA
AACAGATCTT TGATCGTGTT ATAG
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| Protein sequence | MKNHITIVGL LFLASVSLGV NAGQKPKATP TPVENSATQA QAQSLSININ TAQVADLVRL
KGIGEAKAKA IIEFRQANGN FKAVKELEQV KGIGAKLVEK NRSLIVL
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