| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3059 |
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| Symbol | |
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| ID | 6117374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3746543 |
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| End bp | 3747859 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634601 |
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| Product | peptidase M23B |
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| Protein accession | YP_001761425 |
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| Protein GI | 170727399 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00145951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0144005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTAA AGTTGCATAC TCGTAGAACG TCATTTTTTA AGATGCCGCA GTTAAATGTT
CTGGCAGCAT CATTTTCGCA AAAATCCAAT TTTAATAAGA GATTGTTGTT AGGCGCAGGT
TTGCTGATTG GCGCAGCCAT ACTTTGGCCT AGTCATCAAG AATCATTGCC TCAACGTGTT
CCTGTCGAAC TCGATATTGA TGCTATTTTG GCACAATTGA CCCCTTCAAC GCCTGTCGAG
GTCCAGAGCA GTCAACCAGA TTATGTGAAG AGTATTGTCT CTGGCGATAC CTTAAGCGGC
CTGTTTGTGG ATGCTGGGGT AGATCAGCAG AGCATGTACC ATGTGCTTGA AGCGGATCTG
GATGTACTGG CGCTCGATAC ACTGAAACCC GGGAATAAGA TCAGCTTCTG GTTGGATGAT
AAAGGTGAGC TGCAAAAGTT AGAGCTCTAT TTCTCTGCGG CTCGTCAGGT GGTATTTAGT
CGTTTCGATG ACGGTGATTA TAAGGTTGAT GAGATTAATA TTGATGGGAT CTGGCAAAAC
CGCACGGTTT CCGGAGATAT TCAGGGATCT TTTTACCTCT CAGCGAAAAG AGCTGGTTTG
AATGCGGCTG AGATCCAGCG TATCGAATCT CTGCTTAAAG AGAAGTTAAA CTTCGCCAGA
GATCTTAGGG CGGGTGATAC ATTCTCCGTA TTGATGAACG ATCAGTTTAT CGATGGCAAT
GCCACTGGCT CCAGTGATAT TTTGGGGATC ACCATTCATC GTGGTCGTAG CGATATTAAT
GCATATCAAA ACAGTGATGG TAATTTTTAT GACGATCAGG GACGCAGTCT ATCCCGTGCT
TTTCAGCGAA TTCCGTTACA GAAAAACTAC CGTATCAGCT CTAACTTTAA TCGCAATCGT
CACCACCCAG TCACTGGGCG TGTTACCCAT CATAATGGCA CCGATTTCGC GACGCCCATA
GGGACTAAAA TTGTCGCCCC AGGTGATGGT ATTGTCTCCT TGGTCACCAA ACACAGATTT
GCAGGCACCT ATGTGGTGAT AGAGCATGGC AATAAATACC GTACCCGCTA TCTGCACCTG
TCAAAGGCGT TAGTGCACAA AGGACAGAGA GTCTCACGGG GACAGGTGAT TGCGTTATCG
GGGAACACTG GCCGAGTAAC TGGGCCTCAT CTTCACTATG AGTTCCACGT TAATGGCCGA
CCAGTTAACC CGATGAAGGC CAATATTCCG ATGGCAAGTA AGCTGTCGAG CAAAGAGATG
AGTGAGTTTC AGCAACTCGT TAAGATTCGT CAGATGATGA TGGGACAAGA TGTGTAG
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| Protein sequence | MGLKLHTRRT SFFKMPQLNV LAASFSQKSN FNKRLLLGAG LLIGAAILWP SHQESLPQRV
PVELDIDAIL AQLTPSTPVE VQSSQPDYVK SIVSGDTLSG LFVDAGVDQQ SMYHVLEADL
DVLALDTLKP GNKISFWLDD KGELQKLELY FSAARQVVFS RFDDGDYKVD EINIDGIWQN
RTVSGDIQGS FYLSAKRAGL NAAEIQRIES LLKEKLNFAR DLRAGDTFSV LMNDQFIDGN
ATGSSDILGI TIHRGRSDIN AYQNSDGNFY DDQGRSLSRA FQRIPLQKNY RISSNFNRNR
HHPVTGRVTH HNGTDFATPI GTKIVAPGDG IVSLVTKHRF AGTYVVIEHG NKYRTRYLHL
SKALVHKGQR VSRGQVIALS GNTGRVTGPH LHYEFHVNGR PVNPMKANIP MASKLSSKEM
SEFQQLVKIR QMMMGQDV
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