| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3049 |
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| Symbol | |
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| ID | 6117364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3734278 |
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| End bp | 3736395 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634591 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_001761415 |
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| Protein GI | 170727389 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0131887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0662102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTGG TTATTAAGCG GGATGGTTAC CGCACGCCTT TTGACGAAAC AAGGATTAGA
GATGCAGTTG CTGCAGCGGC AATCTCGGCA GGTATTGATG ATAATGGTTA TGCTACTCAA
GTGGCGACTA AGGTTGCTGA TACGGTCGCT AATATGGCAG AAGTTGATAT TCATGACCTA
CAAGATGTCG TTGAAAACCA ACTTATGGAG GGGCCATATA AGTCGCTTGC ACGTGTGTAT
ATCGAATATC GTCACGATAG AGATCTACAT CGCGAAACCA GCAGTCGCCT CAACCGTGAA
ATTCGTGGTT TAGTCGAACA GAGTAACGCT GCGCTGCTTA ACGAGAATGC CAATAAAGAT
GCAAAAGTTA TCCCGACTCA ACGGGATCTA CTCGCGGGTA TTGTTGCTAA GCATTACGCT
ACACGACACA TCTTACCAAA AGATGTTGTG GCTGCTCATG AGTCTGGTGA GATCCATTAT
CACGATCTTG ACTATGCGCC ATTCTTCCCT ATGTTCAACT GTATGTTGAT AGACTTGGCG
GGCATGTTGA CTCAAGGGTT TAAGATGGGC AATGCCGAGA TTGAAACGCC AAAATCTATC
TCGACGGCAA CGGCTGTAAC GGCGCAGATC ATCGCGCAAG TTGCCAGCCA TATATACGGC
GGTACAACGA TTAACCGTAT CGACGAAGTG TTAGCCCCAT TTGTGGCCAA AAGTTTTGAC
AAGCATTACC AAGTCGCACT GACTTGGGGG ATCACTGACG CTAAAGCATT TGCTACAGCG
CAAACCGAGA AGGAGTGTCA CGATGCATTC CAATCCCTTG AGTATGAAGT CAATACCCTA
CATACCGCGA ACGGTCAAAC TCCATTTGTT ACCTTCGGTT TTGGTTTAGG CACCTCTTGG
GAATCAAGAC TTATTCAATC CTCCATGATG AAAGTGAGGA TTGCTGGTCT AGGTAAGAAC
CGTAAAACCG CAGTCTTTCC AAAGTTAGTT TTTGCTATTC GTGATGGCAT TAACCACAAG
AGTGGCGATT GTAACTACGA CATTAAAAAA CTGGCGTTAA AATGCGCAAC CATGCGCATG
TATCCAGATA TTCTTAACTA TGAGCAAGTT GAAAAGGTGA CGGGATCGTT CAAAACTCCT
ATGGGTTGCC GAAGCTTCCT TGGCACCTAC GAAGAGAACG GTGAGCTGCT TCATGAGGGA
CGTAATAACT TAGGTGTTGT TAGCCTTAAT TTACCTCGCG TGGCGCTGGA ATCTCAAGGA
GATGAAGCTG AGTTTTACCG TATTTTAGAT CAGCGTTTAG CCATTGCTCG CAAAGCATTG
GATACCCGCA TTGAGCGATT AGAAGGTGTG AAAGCCAGAG TCGCGCCTAT TCTTTATATG
GAAGGGGCGT GTGGGGTGCG TTTACGTGCT GATGATGAGA TCTCATCTAT CTTCAAAAAT
GGACGCGCTT CTATCTCATT AGGGTATATC GGCTTACATG AAACCATCAA TGCGTTGTTT
GGTTCCGATA AGCACCTATA TGATTGTGAA ACTCTTCGTG AGAAGGCGAT TGAGATCATC
AAGTATATGA AGGCTGCAAC GGTTCAGTGG ACCGAAGAGA CTGGTTACGC CTTTAGCTTA
TACAGCACGC CAAGTGAGAA CCTCTGCAGT CGTTTTTGCA AGTTAGACAC GCAAGTTTAT
GGTGTGGTCG ACGGCGTGAC GCAGAAGGGC TACTACACTA ACAGCTTCCA TCTTGATGTT
GAAAAAGCGG TTAACCCTTA TGACAAATTG GATTTTGAGC AGCCTTATCC TGAATTAACC
AGTGGTGGTT TTATCTGTTA CGGGGAGTAC CCCAATATGC AGCATAATAT CGAAGCTTTG
GAAGATGTGT GGGATTACAG TTACAGCCGC GTCCCCTACT ATGGTACCAA TACTCCAATT
GATGAGTGTT ACGATTGTGG CTTTACTGGT GAGTTTTCCT GTACCAGTAA GGGTTTCACC
TGTCCTAAAT GTGGTAACCA TGAGCCAAGC CGAGTCTCTG TGACTCGCCG TGTTTGTGGT
TATCTTGGCA GCCCTGATGC GCGTCCGTTT AACTTTGGTA AACAGGAAGA GGTTAAGCGC
AGAGTGAAGC ACCTCTAA
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| Protein sequence | MPVVIKRDGY RTPFDETRIR DAVAAAAISA GIDDNGYATQ VATKVADTVA NMAEVDIHDL
QDVVENQLME GPYKSLARVY IEYRHDRDLH RETSSRLNRE IRGLVEQSNA ALLNENANKD
AKVIPTQRDL LAGIVAKHYA TRHILPKDVV AAHESGEIHY HDLDYAPFFP MFNCMLIDLA
GMLTQGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAPFVAKSFD
KHYQVALTWG ITDAKAFATA QTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW
ESRLIQSSMM KVRIAGLGKN RKTAVFPKLV FAIRDGINHK SGDCNYDIKK LALKCATMRM
YPDILNYEQV EKVTGSFKTP MGCRSFLGTY EENGELLHEG RNNLGVVSLN LPRVALESQG
DEAEFYRILD QRLAIARKAL DTRIERLEGV KARVAPILYM EGACGVRLRA DDEISSIFKN
GRASISLGYI GLHETINALF GSDKHLYDCE TLREKAIEII KYMKAATVQW TEETGYAFSL
YSTPSENLCS RFCKLDTQVY GVVDGVTQKG YYTNSFHLDV EKAVNPYDKL DFEQPYPELT
SGGFICYGEY PNMQHNIEAL EDVWDYSYSR VPYYGTNTPI DECYDCGFTG EFSCTSKGFT
CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NFGKQEEVKR RVKHL
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