Gene Swoo_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3042 
Symbol 
ID6117357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3728387 
End bp3728746 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content44% 
IMG OID641634584 
Producthypothetical protein 
Protein accessionYP_001761408 
Protein GI170727382 
COG category[S] Function unknown 
COG ID[COG4628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.132627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0189567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG CAAACAACCC TCTTCACGGC ATTAAACTAG AAGCACTACT CACAGATCTG 
GTCGAACATT ATGGTTGGGA AGGGCTCGCA GATAGAATTG ACGTTCGTTG CTTTAAGAAT
GATCCCAGCA TGAAATCTAG CCTTCGATTT CTACGTAAGA CGCTATGGGC CAGAGAAAAA
GTTGAATACC TCTATTTAAA GATGAATAAG CTGCCACTTC CAGCGAAAAA ACCAAGGGAA
GATGGCTACC AATCCAGTGA TAAAGCACTC CGTAAAGCGG CAAATAAACG AGCAGAGAAT
ACCACCGACA GTGATAAAAA GGCTGACGGG CAAGTGAATG CCGATATTTG GGGAAGTTAA
 
Protein sequence
MTQANNPLHG IKLEALLTDL VEHYGWEGLA DRIDVRCFKN DPSMKSSLRF LRKTLWAREK 
VEYLYLKMNK LPLPAKKPRE DGYQSSDKAL RKAANKRAEN TTDSDKKADG QVNADIWGS