| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3036 |
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| Symbol | |
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| ID | 6117351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3720228 |
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| End bp | 3721694 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634578 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001761402 |
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| Protein GI | 170727376 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000692388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0245093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGGCA ATAGCATGAG CATTGAATTA CCAGTCTTAA TTACTTTTAT CGGCTACCTC
TCCTTAATGA TGGGAATAGG ACTTTGGGCC TACAAAGCCA CTGATTCAGT TGACGACTAT
ATTTTGGGCG GCAGGGGAAT GGGTCCAGCA GTCACGGCTT TAAGTGTTGG TGCATCCGAC
ATGTCAGGTT GGTTATTACT CGGTCTACCA GGGGCTGTTT ACCTTGGTGG TTTAGGAGAA
GCGTGGATCG GTATAGGCTT GGTCTTTGGG GCTTGGTTAA ACTGGCTATT TGTTGCTAAA
CGCCTGCGTA TCTATACGGA ATTTACCGAT AATGCACTTA CCCTCCCCGA CTTCTTTGAA
AAACGTTTTG AAGACAACAA AGGTTTACTT AAGCTTGTTT CAGCCATCAC CATTTTAATA
TTTTTCACCT TCTATGCCTC ATCGGGCATG GTAGGCGGTG CCATACTGTT TGAAAAAGTG
TTCGGCTTAG ATTACACCTT AGCCCTCATC ATAGGCTCAA CGATTATTGT TGCGTATACC
TTTGTTGGTG GCTTCTTTGC CGTAAGCTGG ACAGACTTTT TTCAGGGCTG TTTAATGTTA
GTCGCGCTGC TTATCGTTCC AGTCGCTATC TTTTCTCAAC CTGAAACACA AAACGGACTG
GACTCTTTAG ATCCTTCCAT GTTGGCACTG TTTCATGAAA ACACCACCTT TATCGGGCTT
ATCTCTTTAT TGGCATGGGG ACTGGGCTAC TTTGGTCAGC CTCACATTCT TTCACGTTTT
ATGGCTATCA ATAGCCCTGA CGATATTAAA GTATCTCGTC GTATTGCTAT GAGCTGGATG
TTAGTTGCTC TGATTGGGGC ACTGGCCACC GGTATTGCGG GTAGTTTGTA CTTTGCTAGC
GAACCGCTAG CAAATCCTGA GACTGTCTTC ATCCACTTAG CCCATGCAGC ATTCAACCCT
TGGATTGGCG GCCTGTTAAT TGCGGCAATA CTCTCTGCGA TTATGAGTAC GATTGACTCC
CAACTTTTGG TTTGCTCAAG TGTTATCACC GAAGATTTCT ATAAAAAATG GCTACGTCCA
GAAGCAAGCA GCAAAGAGCT GATGCTAGTG GGTCGTATTG GTGTCCTTGT CATTGCGGTT
ATTGCAGGCA TCGTAGCTCT AAACCCAGAG AGCAGTGTAC TTGGATTGGT CAGCTACGCT
TGGGCTGGTT TCGGAGCAGC ATTTGGTCCA GTTGTACTGC TAGCACTGTT TTGGAAGGAT
TATAGCCGTA ACGGTGCTAT TGCAACTATC TTAGTTGGAG CGATCACCGT TGTTATTTGG
AAGCAGCTAT CTGGCGGAAT TTTTGATCTC TATGAGATAC TGCCAGGCTT TATATTTGCC
ACGCTTATCG GTGTGATTGT GAGCCGATTC TCAGCGCCTT CTGATGCAAC AAAAGAACAA
TTTAGAGTAT TTACTTCAAA ACTTTAA
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| Protein sequence | MNGNSMSIEL PVLITFIGYL SLMMGIGLWA YKATDSVDDY ILGGRGMGPA VTALSVGASD
MSGWLLLGLP GAVYLGGLGE AWIGIGLVFG AWLNWLFVAK RLRIYTEFTD NALTLPDFFE
KRFEDNKGLL KLVSAITILI FFTFYASSGM VGGAILFEKV FGLDYTLALI IGSTIIVAYT
FVGGFFAVSW TDFFQGCLML VALLIVPVAI FSQPETQNGL DSLDPSMLAL FHENTTFIGL
ISLLAWGLGY FGQPHILSRF MAINSPDDIK VSRRIAMSWM LVALIGALAT GIAGSLYFAS
EPLANPETVF IHLAHAAFNP WIGGLLIAAI LSAIMSTIDS QLLVCSSVIT EDFYKKWLRP
EASSKELMLV GRIGVLVIAV IAGIVALNPE SSVLGLVSYA WAGFGAAFGP VVLLALFWKD
YSRNGAIATI LVGAITVVIW KQLSGGIFDL YEILPGFIFA TLIGVIVSRF SAPSDATKEQ
FRVFTSKL
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