| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3026 |
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| Symbol | fadJ |
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| ID | 6117341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3707501 |
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| End bp | 3709642 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634568 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001761392 |
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| Protein GI | 170727366 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.144673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.316904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA CATTTAATTT AGCTAAACGT GAAGATGGCA TTGCCGTACT GACCATGGAT
GTTCCTGGCG AGAGTATGAA TACACTGCGG GCCGAATTTG GACCTGAGAT TAGCCAAGTG
TTAGCTGATA TCAAGGGTGA TAGCAGCATT AAAGGTTTAG TGCTTATCTC TGGTAAAAAA
GACTCTTTTG TTGCTGGCGC CGATATCTCT ATGTTGGATG CTTGTGAAAC GGCTGCAGAT
GCAAAGCAAC TCTCTCAGCA GGGACATATT GTTTTTAATG AACTTGAGTC ACTCTCTATT
CCTGTTATTG CTGCCATTAA CGGTGCTTGT TTGGGGGGCG GTTTAGAGCT GGCTCTTGCT
TGTCATCAGC GTATATGTAG TTTAAACAGT AAAACCATGA TGGGGGTGCC TGAAGTTCAG
CTAGGACTCC TTCCTGGTGG TGGCGGTACA CAAAGGTTGC CTAGGTTAGT TGGGATCACA
TCTGCATTGG ATATGATGCT AACGGGCAAA CAGTTGCGTC CAAAGCAGGC GCTTAAACTG
GGTTTGATTG ATGACATGGT GCCAGAATCG ATACTGCTGC AAACTGCGGT AGAGATGGCA
TTGAAAGGTA AGCGTGTCTC GTCAAAACCA AAACAGTCAA TGATCAATCG TGTGCTTGAG
GGCACAAATG CTGGCCGCAG TATTATTTTT GATCAAGCGG GCAAGCAGGT ACAGAAGAAG
ACACAGGGTA ATTATCCTGC ACCCGCTAAA ATTATCGATT GTGTACGACA AGGGATGGCT
AAAGGCATAG TTAAAGGGCT TGAAGTTGAG GCAAACCATT TTGCGGATCT TGTGGTCTCG
AAAGAGTCTG AAGCATTAAG AAGTATCTTT TTTGCCACCA CTGAGATGAA AAAAGAGAGT
GGGGCAGGTG ATGCTAAGCC ACGAAGTGTC AAGAAGGTGA TGGTACTTGG TGGTGGTTTG
ATGGGGGGCG GTATCGCCTC TGTGACGACG ACTAAGGCTA AGATCCCAGC TCGAGTCAAA
GATATCAGCG AGCAGGGACT AAGCAACGCA CTGTCCTATG CTTACAAGTT ATTGGATAAA
GGAGTTAAGC GTCGTCACAT GACGCCAGCA GTGAGAGATA ATCTCATGTC CTTGATGACA
ACAACAACTG AGTATAAAGG CATAAAAGAC GCTGATATTG TAGTTGAAGC TGTATTTGAA
GATCTAAATC TTAAACACCA GATGGTTAAA GATGTTGAGC GTGAATGTGG CGAAAATACT
ATCTTTGCAT CGAACACCTC CTCTTTGCCA ATTGCCCAAA TAGCGCAAGC TGCGACTCGA
CCTGAAAATG TTATCGGTTT GCACTATTTT TCGCCAGTAG AGAAGATGCC ATTGGTTGAG
GTTATTGCTC ATAAGAAAAC CTCTGCCGAA ACGATTGCAA CGACAGTTGC TTTTGCACGT
AAACAAGGTA AGACACCAAT TGTTGTACAA GATGGTGCTG GTTTTTACGT GAATCGAATT
TTAGCTCTGT ATATGAACGA AGCTGCGCAA CTACTTCTTG AAGGCAGAGC TGTTGAAGCC
TTAGATAAGG CGTTAGTTAA GTTTGGCTTC CCCGTTGGAC CTATGACGCT ATTGGATGAA
GTTGGCATTG ATGTCGGTGC TAAGATATCG CCTATTCTAG AGGGAGAACT TGGAGCACGC
TTTTTAGCGC CAGCTGCATT TGATAAGTTA TTGGCAGATG AGCGTAAAGG TCGTAAGAAT
AACAAAGGCT TCTACCTTTA TGGCAGTAAA AGTAAGAAGA AAACTAAGCA AGTAGATAGT
TCAGTTTATG GCGTGTTGGG GTTAAGAACA CCAGAAAATA GCAATGAGCA TTCTAGCGAG
CTTGCTGAAA TGTCACAGCG CTGTGTTGTG CAGATGCTTA ATGAAGCAGT TCGTTGTTTA
GAGGAGGGGA TTATTGCCTC ACCAAGAGAT GGTGACATCG GCGCTATTTT TGGGATAGGT
TTCCCTCCTT TCTTAGGGGG GCCATTCCAC TACATAGATA CACTAGGTGC TGATGCTTTA
GTGTCTAAAC TCGAAGCTTA TCAGGCTGAG TTTGGTGATA GATTTACACC TTGTGATCAG
CTAAGAAAGA TGGCTAAAGA TGGTGTTAAG TTCTTTGGTT AG
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| Protein sequence | MDKTFNLAKR EDGIAVLTMD VPGESMNTLR AEFGPEISQV LADIKGDSSI KGLVLISGKK
DSFVAGADIS MLDACETAAD AKQLSQQGHI VFNELESLSI PVIAAINGAC LGGGLELALA
CHQRICSLNS KTMMGVPEVQ LGLLPGGGGT QRLPRLVGIT SALDMMLTGK QLRPKQALKL
GLIDDMVPES ILLQTAVEMA LKGKRVSSKP KQSMINRVLE GTNAGRSIIF DQAGKQVQKK
TQGNYPAPAK IIDCVRQGMA KGIVKGLEVE ANHFADLVVS KESEALRSIF FATTEMKKES
GAGDAKPRSV KKVMVLGGGL MGGGIASVTT TKAKIPARVK DISEQGLSNA LSYAYKLLDK
GVKRRHMTPA VRDNLMSLMT TTTEYKGIKD ADIVVEAVFE DLNLKHQMVK DVERECGENT
IFASNTSSLP IAQIAQAATR PENVIGLHYF SPVEKMPLVE VIAHKKTSAE TIATTVAFAR
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGRAVEA LDKALVKFGF PVGPMTLLDE
VGIDVGAKIS PILEGELGAR FLAPAAFDKL LADERKGRKN NKGFYLYGSK SKKKTKQVDS
SVYGVLGLRT PENSNEHSSE LAEMSQRCVV QMLNEAVRCL EEGIIASPRD GDIGAIFGIG
FPPFLGGPFH YIDTLGADAL VSKLEAYQAE FGDRFTPCDQ LRKMAKDGVK FFG
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