| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2993 |
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| Symbol | |
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| ID | 6117308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3667199 |
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| End bp | 3669316 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634535 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001761359 |
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| Protein GI | 170727333 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.162079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.156503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGC AGAAACTGAT CGAATTCACA CTTGTAACTG GATTAATGGC ACCTTTCGCA
GCAATAGGTA GCGAGGGCCC CGCTGAACGA GTTTCCACTG AGCATGCCAA GGATAACCTT
GAACGCATCA CAGTCACCGC GTCACGTCAG CGTACTTTAG ATACGGATCT GGCCATGTCA
CTACAAGGAG TCAGCACAGA AGAGTTAGCC TTAGACAGTG GACAGCATGT CGCCGAATCA
CTAAACAGTA TTTCAGGGGT GCTAATTGAC CAACTCTCTG GCGGTCAAGG CCATAAAGCA
GCAATTAGAA TGCCCATGAA TACCAGCGGT TATTACTTGT ATTTACAAGA TAATATTCCG
CTTCAGTCTC CAGCCTTCTT TAACCATAAT GCCCTTTGGT GGTCCAGTTT TAATTCAAAC
ATTGCCACAA TGGAGGTCTT AAAAGGAGCT GGCACCGCCT TATATGGCTC AGGAGCCGTC
GCGGCAACGG TAAATATCTT GTCTAAGGAG GTGGCTGGAT CAGATCAAAC AGACATGGGA
TTGATACTAG GACAAGATGA TTACGCTAAG GTGCAATTCA GTCACAGCAG TATACTCTCT
GGTACTCAAG GCATTCGCGT GTCAGCTTCA TACCTAACCA ATGACGGTTG GCGAGATCAC
ACTGGATCAG AACGGGCTGA ATTAACACTC AGGCATGAAT TAGAGCTCGA AAACAATGAA
CGCTTAGTCA CCTCTTTAGT GATTTCAGAC CTCGAACAGG AGATGGCGGG AAATTTAACT
CAAGCCTTGT ATGACAATGA TAAAACAAAC TCGGGATTAT CAGATGAGGT ACTAGCCAGC
GATCCATTAC GCAAAACCAA ATATATGCGA CTGTCTAGCC ATTGGGATAA AACCACCGAC
AGTAGTTACT TTTCCCTCAT TCCATATTAT CGATACCGTA CTAACGATTA CACCGCAACG
TGGAACAAAA ACATGCCCAA AGTGGAGTCA GAGGTACACA CTTTAGGCTT ACTGGCACTA
GCAAATTTTG AGCATGATGG CGACAGTGAC ACCAGTGTTG GCTTAGATAT CGAATTGACT
GAAGGGGATC AACTCTCCTA TCAGCCCCTA GACTATACCA GCACAGGTTA CAGGGCTGAT
ACCTTCATTA AAGGGGAGAG ATTTTATGAT GACACCACTC AATACTTGAG TCTTTCTCCC
TATATTCAGC ACAAGCGGGA GTTAACAGAA AACCTCGATT TAACCTTAGG CGCCAGATAT
GACTATGGTC AATATGATTT TAATAACCAC TTAGGTGTTT ATGGTGACAT TGGCCATGGG
AAGCGCAGTG TTGAAGACAG AACAGATAAC TTTAACCATA TTAGTCCTAA GGCAAGTTTA
AACTATCATT TGAGTCAAGA TAGCAGCCTC TATCTACGCT ACGCCAACAG TTTCCGCTTA
CCAACAGCCA GTAGTCTGTA TCATTTGACC ATCAAAGATG ATGGCAATGC CGAAGCGGTC
GATCCTGAGA TTTCAGATAC CTATGAACTT GGGTTTAAAG CCAATTGGCA GTCAATATCC
CTCGACACAG CTGTTTATTA TATGGATGTA GACGACGGTA TTGTGCGGGC TTATAACGAT
GCAGGCCAGC GCTATTTAAC CAATGCAGCC CGTGTTATTC ATCAAGGAGT TGAAGTCTCT
GTGGCCTGGA AGATTAATGA ACAGCTAAAT CTCAGTACAG CTTACAGCAG ATCTCACCAT
GAATTTGATC AACATGAAGC ATACTCAGGT AATGAAATGG CGGCTGCACC AGAGCATATC
GCTAACGTGC GATTACGTTA TAAGCCCGAG TTTATACAGG GCTTAACTAG CATGCTAGAG
ATCCAATCCG TAGGAGAATA CTGGTTAGAC GATGCGAACA GTCAAGATGA TGAGGGAATC
GATCGTATTG AAGATGGCTA CACCATCGCC AATATCAAAG CCCTTTATCA ATTCTCTAAG
CAGCTATCTT TCAATGCCAG AGTACTGAAT ATCACCGATG AGGAGTATGC ACAGGAAGCC
TCATACCGAT ACAACAAAAC ATTTTACTCT CCAGGCGCAC CTAGAACCGC CTACATTGGC
GTAAACTATC AATGGTAA
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| Protein sequence | MSKQKLIEFT LVTGLMAPFA AIGSEGPAER VSTEHAKDNL ERITVTASRQ RTLDTDLAMS
LQGVSTEELA LDSGQHVAES LNSISGVLID QLSGGQGHKA AIRMPMNTSG YYLYLQDNIP
LQSPAFFNHN ALWWSSFNSN IATMEVLKGA GTALYGSGAV AATVNILSKE VAGSDQTDMG
LILGQDDYAK VQFSHSSILS GTQGIRVSAS YLTNDGWRDH TGSERAELTL RHELELENNE
RLVTSLVISD LEQEMAGNLT QALYDNDKTN SGLSDEVLAS DPLRKTKYMR LSSHWDKTTD
SSYFSLIPYY RYRTNDYTAT WNKNMPKVES EVHTLGLLAL ANFEHDGDSD TSVGLDIELT
EGDQLSYQPL DYTSTGYRAD TFIKGERFYD DTTQYLSLSP YIQHKRELTE NLDLTLGARY
DYGQYDFNNH LGVYGDIGHG KRSVEDRTDN FNHISPKASL NYHLSQDSSL YLRYANSFRL
PTASSLYHLT IKDDGNAEAV DPEISDTYEL GFKANWQSIS LDTAVYYMDV DDGIVRAYND
AGQRYLTNAA RVIHQGVEVS VAWKINEQLN LSTAYSRSHH EFDQHEAYSG NEMAAAPEHI
ANVRLRYKPE FIQGLTSMLE IQSVGEYWLD DANSQDDEGI DRIEDGYTIA NIKALYQFSK
QLSFNARVLN ITDEEYAQEA SYRYNKTFYS PGAPRTAYIG VNYQW
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