| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2976 |
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| Symbol | |
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| ID | 6117291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3642112 |
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| End bp | 3644112 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634518 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001761342 |
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| Protein GI | 170727316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.930481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT ATATCGCAGA GAAACCCTCC CTTGGTCGGG CGATTGCCGA CGTGTTGCCT
AAACCCCATA AAAAAGGTGA CGGGCACATT ATTGCTGGCA ATGGAGATTG TGTTTCTTGG
TGTATTGGCC ACCTTCTTGA GCAAGCCGAG CCTGATGCCT ATGACCCTGA GTTCAAATCG
TGGAAGTTTG AACACCTGCC AATTGTTCCA GATAGCTGGA AAATGAAAGC TAAGCCGAAA
ACTCGCTCAC AACTAACTAT TTTAAAAGGA TTAATTAAGC AGGCCTCACA ACTTGTTAAT
GCCGGAGATC CTGATAGAGA GGGACAACTT CTGGTCGATG AGGTGATCGC TCATTTTGGC
GTTAAAGGGG ATAAATTACA TCAAACAAAA CGTTTGTTGA TAAGCGATCT TAACCCACAA
GCGGTAAAGC GAGCCTTAGG ACAGATGCGC AGTAATCGTG AGTTCATTCC TCTATCCACC
TCTGCTTTAG CCCGCTCACG GGCTGATTGG TTATACGGGC TAAATATGAC TCGGGCATAT
ACGATTCAGG GACGCAAAGT TGGTTATCAA GGTGTACTGT CAGTGGGCCG TGTACAGACC
CCATTACTTG GCTTAGTGGT TCGCCGAGAT GAGGAGATCG CTAATTTTGT CTCTAAACCA
TTCTTTGAGG TGTTAGCCAA TCTTAGTACT GAGCATAATG AACATTTTAA AGCGAAATGG
CAGCCCAGCG AAGCATGCCA AGCCTATATG GACGAAGAGG GGAGAGTGCT TTCAAAAGGC
TTAGCGCAAA ATGTCGTTGG CAGGATCACT GAGCAGCCAG CTTGTGTGGT GGGTCTAGAC
AGTAAAGACA AGAAACAGAA TCAGCCACTT CCTTATAATC TTTCATCCTT GCAGATAGAT
GCCGCTAAGC GTTTTGGCAT GAGTGCTAAG GAGGTATTAG ATACTTGTCA GGCACTCTAT
GAGAAATATA AACTGATCAC CTATCCCAGA TCCGATAGTC GTTATCTACC TATTGAGCAG
TTCTCGATGG CACCTTCAGT GATTAAAGCT GTGCTGAGTG GCGCAAGCGA GTTAGTGATA
GGGCCTGAAC AGCCTGATTC TAAAATTAAG TCCAAGGCGT GGAACGATAA GAAAGTTGAT
GCCCATCACG CCATTATTCC CACAGAGAAA ACGGCAAATT TAGCTGGATT AACGCCAAGA
GAGAGGCAGA TATATCTGCA GCTTGCTCGC CAGTATCTAG CGCAGTTTTA CAGCCCCTAC
CAATACCATG AAACCTTGGT TGAGGTGGAG ATTGCGGGAG GTAAGTTCAA AACCAAGGCT
AAGCAAGATA AATCCCTAGG ATGGAAACAG CTTTTCGCTA AAAAGGGGGA AAAACTGGAG
GAGAAGGGGA GCGCTGTTGG CGACAGTAGT GATGATGACT TAGACGCTTT ACAAAAGTTA
CCTCAGCTTA AAAAAGGTCA AGCTCTTCAC TCGGGTCAAG GTGAGCTCAT TGAGAAGCAG
ACTCAAGCTC CCAAGCATTT TACCGATGCG ACTTTACTTG GTGCTATGAC AGGGATAAAT
CGCTATGTTA CCGACCCTGA GATCCGCAAG ATTTTAAAAG ACACCGACGG TCTAGGTACC
GAGGCTACAC GGGCGGGAAT TATTGAGTTG CTGTTTAAGC GAAATTACCT AAGCAGAAGT
GGTAAATCCA TTGTTGCAAC CGACGTCGGA AAGGGGCTGA TTAATAGCCT GCCAATGAGT
GCAACTACGC CAGATATGAC TGCACTTTGG GAAAGTAACT TAGATGCTAT TAGTCGTAAG
GAAGCCAAGT ACATCAACTT TATGTCACCA CTGGTGGATT CACTTGCCCA ACTTATCACC
CAGGCTGGTG CGCAACTGCC TACCTCGTTA CAAGGTATTA AGGCCCCTAA ATCAAACTTT
AAAAAAAGGG CATACAGTAG AAAGAAAACA ACCAAGAGTG CTGCTAAACC CAGTGGCAGA
AGAGCGACAA AGGTCAGCTA G
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| Protein sequence | MILYIAEKPS LGRAIADVLP KPHKKGDGHI IAGNGDCVSW CIGHLLEQAE PDAYDPEFKS
WKFEHLPIVP DSWKMKAKPK TRSQLTILKG LIKQASQLVN AGDPDREGQL LVDEVIAHFG
VKGDKLHQTK RLLISDLNPQ AVKRALGQMR SNREFIPLST SALARSRADW LYGLNMTRAY
TIQGRKVGYQ GVLSVGRVQT PLLGLVVRRD EEIANFVSKP FFEVLANLST EHNEHFKAKW
QPSEACQAYM DEEGRVLSKG LAQNVVGRIT EQPACVVGLD SKDKKQNQPL PYNLSSLQID
AAKRFGMSAK EVLDTCQALY EKYKLITYPR SDSRYLPIEQ FSMAPSVIKA VLSGASELVI
GPEQPDSKIK SKAWNDKKVD AHHAIIPTEK TANLAGLTPR ERQIYLQLAR QYLAQFYSPY
QYHETLVEVE IAGGKFKTKA KQDKSLGWKQ LFAKKGEKLE EKGSAVGDSS DDDLDALQKL
PQLKKGQALH SGQGELIEKQ TQAPKHFTDA TLLGAMTGIN RYVTDPEIRK ILKDTDGLGT
EATRAGIIEL LFKRNYLSRS GKSIVATDVG KGLINSLPMS ATTPDMTALW ESNLDAISRK
EAKYINFMSP LVDSLAQLIT QAGAQLPTSL QGIKAPKSNF KKRAYSRKKT TKSAAKPSGR
RATKVS
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