| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2953 |
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| Symbol | |
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| ID | 6117268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3617861 |
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| End bp | 3620182 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634497 |
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| Product | peptidase M14 carboxypeptidase A |
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| Protein accession | YP_001761321 |
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| Protein GI | 170727295 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA TAACAATGAA AACAGCAGAA AGCATCGCAC GATTAACCAA GGGAATAACA
CTGAGTAGAC TCACCAAAAG CCTCATTATC TCTGGCCTTA TCTTTAGCTC TCTCGCTCAA
TCACAGGCTC AGGCAATAGA TGACAGTCAG CAGACCTATA AAGTCACCTT TCCCGATGAA
CAGACTTTCC TAAAGGCGAA CATCAGCCTT CACAATGAGA AGATAAAAAC CGATCCAACC
CAGCGAGCAA TTTGGGTGCC CTTATCCAGT GATGAGCTGA GCAGACTAAA ACCTTTTGCC
ACCAGCATGG CTAAAGTTGA CGATCCCGCC AGCCTATATC CACAAAAAAT CGCTTCCCAG
AGCAATCTCC TATCAGGGAT CCCAGGTTAT AGCTGTTACC CAACAGTTGA GGAGACTCAA
ACAGATATCG AGCAGCTCGT GAGCCAAAAC CCAAACTTTG CCACCATAGA GGACATTGGA
GACTCATGGC AAAAACAGGC GGGCAATGGC GGCTATGATC TCAACCTGTT AAAGCTCACC
AATAGCCAAG TGACAGGTGA TAAGCCAAAA CTTTTTATCC ACGCCGCCAT GCACGCAAGA
GAATACGCAA CTTCACCTTT GGTATTGCAG TTTGCTAAGG ATCTGCTTAG TGAACGTGAT
ACTGATGCTG ATAGCCAGTG GCTGCTGGAT AGACACGAGA TCCACCTTTT ACTGCATATG
AATCCAGATG GGCGTAAGAA AGCAGAAACC GGGTTATCCT GGCGCAAAAA CGCCAATCAA
AACTACTGTG GCAGTAACCC TAATGCGATA GGAACCGATC TTAACCGTAA TTTTAGTTGG
GGTTGGAATA CGGTTGAGCA AGGCTCAAGC GGCAATGAAT GTAGCAATAT CTTCCGTGGT
CCAAGTGCAG GTTCAGAGCC AGAAACCCAA GCGGTAGAAG CCTATGTAAG AGCACTATTT
GGTGATCACC GAGGGCCAAA CCGCACCGAT GCCGCGCCTG ATACCACCCA AGGCCTACAT
ATCGATGTCC ACTCCTACAG TGAGCTCGTA CTATGGCCCT GGGGCGGCAC AAACGCGCTA
GCCCCCAATG GCGCAGCGAT GCGAACACTT GGTAGAAAAC TCGCTCGTTT TAACGGCTAT
ATGCCGATGC AAAGTGTTGG ACTTTATCCA ACAGATGGCA CCAGTGACAA CCTAAGCTAT
GGCGAGCTAG GCATTCCCCA CATGACCTTC GAGTTAGGTA CTGATTTTTT CCAAAGTTGC
AGCAGCTATA ATGACAAGGT ACTACCTGAT AACCTTAAGG CATTAAAGTA CGCAGCAAAA
ATCGTCGAAG CGCCGTATCT GATCCCATCG GGGCCTGATA TTACCGAGAT CAGCAGCGTT
GGTCAGCCTC TCAATGCCAT AGCGCAGAAC TATCGAGTCA CCCTTAAGGT TACCGCATCC
GATGACAGGT TCAGCAGACG AGGCGGCACA GAAGCCACTC AAGATATTGC TGAGATTGCC
CTCTATATTG ATGATGCCCC TTGGGATGGC GGACAAGCAA CCTTATTAAC TGCAACGGAT
GGTTCTTTTG ATGAGAAAAC TGAGCAAGGT GAGCTGCAGC TCAACGCCAA TGATTTAAGC
TTAGGTCAGC ACACCCTCTA CCTAAAAGCC AAAGATACCA GTGGTCAATG GGGTGCACTT
TCAGCCCAGT TCATTCAGGT TATTGCACCA CAAGCAAACC AAGCGCCACA AGCAAACTTT
AGCTTCCAAT GTGATGAATT CACTTGTCAA TTTGATGCAA GTAGCAGTGC CGATCCTGAA
GGTGATAGCC TAAGTTACGC CTGGCAGTTA GGGACAGGCA CAAGTAGAGA GGCTCAACCC
AGTTATCAGT TTTCCAGCAG TGAACTGACC GATAATAAAG TTGAAGTAAC ATTAACAGTC
AGCGACCCTC AAGGTCTAAG CCATAGCCAA ACTCAACATT TAACCTTAAG TGCCAACCAA
GCTCCGAAAG CCAGCTTTAC CGCCAGTTGC ACACACTTAG TCTGTCAAAT CGATGCAAGT
GCCAGCTCAG ATCCCGACGC AGATACACTC AGTTATCAGT GGCAGCTAGG TGATGGAAAC
AGCAGTGATA AACTGCAACT CACACATAGC TATACCCAAG CCGGAACCTA TAACATAGTA
CTTACGGTCA GTGATGGTAA AACAGATAAC AGCTCAGAGA AAAGTGTCAC AGTAACGGTA
GCCCCAACTC CCGAACCCAG TGAAAACGGT AGCTCAGGAG GTGCAATAGG ATTATTCAGC
TTATTACTGC TGGCACTTGG GATAAGACGA CAAACGAGAT AA
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| Protein sequence | MAEITMKTAE SIARLTKGIT LSRLTKSLII SGLIFSSLAQ SQAQAIDDSQ QTYKVTFPDE
QTFLKANISL HNEKIKTDPT QRAIWVPLSS DELSRLKPFA TSMAKVDDPA SLYPQKIASQ
SNLLSGIPGY SCYPTVEETQ TDIEQLVSQN PNFATIEDIG DSWQKQAGNG GYDLNLLKLT
NSQVTGDKPK LFIHAAMHAR EYATSPLVLQ FAKDLLSERD TDADSQWLLD RHEIHLLLHM
NPDGRKKAET GLSWRKNANQ NYCGSNPNAI GTDLNRNFSW GWNTVEQGSS GNECSNIFRG
PSAGSEPETQ AVEAYVRALF GDHRGPNRTD AAPDTTQGLH IDVHSYSELV LWPWGGTNAL
APNGAAMRTL GRKLARFNGY MPMQSVGLYP TDGTSDNLSY GELGIPHMTF ELGTDFFQSC
SSYNDKVLPD NLKALKYAAK IVEAPYLIPS GPDITEISSV GQPLNAIAQN YRVTLKVTAS
DDRFSRRGGT EATQDIAEIA LYIDDAPWDG GQATLLTATD GSFDEKTEQG ELQLNANDLS
LGQHTLYLKA KDTSGQWGAL SAQFIQVIAP QANQAPQANF SFQCDEFTCQ FDASSSADPE
GDSLSYAWQL GTGTSREAQP SYQFSSSELT DNKVEVTLTV SDPQGLSHSQ TQHLTLSANQ
APKASFTASC THLVCQIDAS ASSDPDADTL SYQWQLGDGN SSDKLQLTHS YTQAGTYNIV
LTVSDGKTDN SSEKSVTVTV APTPEPSENG SSGGAIGLFS LLLLALGIRR QTR
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