Gene Swoo_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2927 
Symbol 
ID6117242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3584592 
End bp3585398 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content47% 
IMG OID641634471 
Productexonuclease III 
Protein accessionYP_001761295 
Protein GI170727269 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00530845 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG TCTCATTTAA TATCAACGGC ATTCGCGCCA GATTGCATCA ACTCCAGGCC 
CTTATCGATA GCCACCAGCC TGACATTATC GGTCTGCAGG AAACCAAGGC CCATGATGAT
GTATTCCCAG TGGCAGATGT GGAAGCCATG GGTTACAAGG TCCACTATCA CGGTGGCAAA
GCACACTATG GTGTCGCTAT GCTATCTAAA CTTGAGCCAG TTAAGGTACA AAAAGGTTTC
CCCACTGACG GTGAAGATGC GCAGCGTCGC ATGATCATGG GGACATTTAC CCAAGAAAAT
GGCCGCCCAT TAACGGTACT CAATGGTTAC TTCCCTCAAG GTGAAAATAT CAGCCATGAG
ACCAAGTACC CAGCTAAGCG TCAGTTCTAT AAAGATCTAA TGATCTATTT AAACGAGCAC
CATAGCGCAG ATGAAGATAT TGCCGTGATT GGTGACATCA ATATTTCACC GATAGATCTC
GACATCGGCA TCGGTGAGCC AAATGCGAAA CGCTGGCTTA AGACAGGTAA ATGTAGCTTC
CAGCCAGAAG AGCGTGAGTG GCTAAAAACA CTGATGGACT GGGGACTGCT CGATACGTTC
CGCGAACTGC ACCCAGAGCG CGTTGATCGT TATTCTTGGT TTGATTATCG CAGTAAAGGG
TTTGATGATA ATCGCGGTCT ACGTATTGAC GTAGTATTGG CAACCAAATC ACTCGCTGAT
CGCCTAGTCG AATCCGATGT GGATTACGAT CTACGCGGCA TTGAAAAGCC CTCAGATCAC
GCACCAATCT GGAGCAGTTT TAAGTAG
 
Protein sequence
MKIVSFNING IRARLHQLQA LIDSHQPDII GLQETKAHDD VFPVADVEAM GYKVHYHGGK 
AHYGVAMLSK LEPVKVQKGF PTDGEDAQRR MIMGTFTQEN GRPLTVLNGY FPQGENISHE
TKYPAKRQFY KDLMIYLNEH HSADEDIAVI GDINISPIDL DIGIGEPNAK RWLKTGKCSF
QPEEREWLKT LMDWGLLDTF RELHPERVDR YSWFDYRSKG FDDNRGLRID VVLATKSLAD
RLVESDVDYD LRGIEKPSDH APIWSSFK