Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2927 |
Symbol | |
ID | 6117242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3584592 |
End bp | 3585398 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641634471 |
Product | exonuclease III |
Protein accession | YP_001761295 |
Protein GI | 170727269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00530845 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG TCTCATTTAA TATCAACGGC ATTCGCGCCA GATTGCATCA ACTCCAGGCC CTTATCGATA GCCACCAGCC TGACATTATC GGTCTGCAGG AAACCAAGGC CCATGATGAT GTATTCCCAG TGGCAGATGT GGAAGCCATG GGTTACAAGG TCCACTATCA CGGTGGCAAA GCACACTATG GTGTCGCTAT GCTATCTAAA CTTGAGCCAG TTAAGGTACA AAAAGGTTTC CCCACTGACG GTGAAGATGC GCAGCGTCGC ATGATCATGG GGACATTTAC CCAAGAAAAT GGCCGCCCAT TAACGGTACT CAATGGTTAC TTCCCTCAAG GTGAAAATAT CAGCCATGAG ACCAAGTACC CAGCTAAGCG TCAGTTCTAT AAAGATCTAA TGATCTATTT AAACGAGCAC CATAGCGCAG ATGAAGATAT TGCCGTGATT GGTGACATCA ATATTTCACC GATAGATCTC GACATCGGCA TCGGTGAGCC AAATGCGAAA CGCTGGCTTA AGACAGGTAA ATGTAGCTTC CAGCCAGAAG AGCGTGAGTG GCTAAAAACA CTGATGGACT GGGGACTGCT CGATACGTTC CGCGAACTGC ACCCAGAGCG CGTTGATCGT TATTCTTGGT TTGATTATCG CAGTAAAGGG TTTGATGATA ATCGCGGTCT ACGTATTGAC GTAGTATTGG CAACCAAATC ACTCGCTGAT CGCCTAGTCG AATCCGATGT GGATTACGAT CTACGCGGCA TTGAAAAGCC CTCAGATCAC GCACCAATCT GGAGCAGTTT TAAGTAG
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Protein sequence | MKIVSFNING IRARLHQLQA LIDSHQPDII GLQETKAHDD VFPVADVEAM GYKVHYHGGK AHYGVAMLSK LEPVKVQKGF PTDGEDAQRR MIMGTFTQEN GRPLTVLNGY FPQGENISHE TKYPAKRQFY KDLMIYLNEH HSADEDIAVI GDINISPIDL DIGIGEPNAK RWLKTGKCSF QPEEREWLKT LMDWGLLDTF RELHPERVDR YSWFDYRSKG FDDNRGLRID VVLATKSLAD RLVESDVDYD LRGIEKPSDH APIWSSFK
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