| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2879 |
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| Symbol | |
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| ID | 6117194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3520734 |
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| End bp | 3521639 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634425 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001761249 |
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| Protein GI | 170727223 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00417764 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTACT CACTCAAACA GATCACCGTT TTTGACGCCG TAGCCAGCCT AGAGAGTGTC
AGCGCTGCAG CAAGAAAATT ATCTATGACC CAGTCGGCCG TTAGTATGTC ACTGGGTCAA
TTAGAAAATT TGTTGGGGCG ACCACTTTTT ATTCGCCAGG GGAACCGGTT AACATTAAGC
CACTGGGGTA ACTGGTTACG TCCTAAAGCC AGACGCTTGC TACAAGATGC TCAACATATC
GAATTAGGCC TTCACGAACA ACATCTTATC AGTGGTCGGT TCCGTTTATG CTCCAGCCAA
ACAGCTGCTG AACATCTGAT CCCTGAACTT ATCAGCAGAA TTGATACTGA TTTTCCTGAG
TTAAGGATCG ATCTTATGGT AGAAAATACC GAAAATGTGA TCGATGGACT GCTTAACTAT
GAGTTTGATC TTGGCATCAT CGAAGGTCGT AATGACGACA GTCGCTTGCA TCAGGAGCGT
TGGATTGACG ATCATCTTGT AGTCTTCTCC TCACCACATC ACCCCTATGC CAAGTATGAA
AGTGCCAGCT TATCTCAACT TGAACAAGCC AAATGGGTAT TGCGGGAGCA AGGTGCTGGA
ACAAGACGAA TTTTCGAAGG CGCTATTCAC GGCATTATCG AGAAACTCAA TGTATGGAAA
GAGTATGAGC AGGTATCAGT ACTAAAATCT TTGGTTAAAA ATGGCCAATA TATCAGTAGC
CTGCCATATC TAGATGTAGA GAAAGAGGTC GCCAATGGTG AACTGGTAAT TCTACCCACA
CCGCAACTCA ATATGCAGCG TCACCTTTCA TTTATCTGGC GTGCAGATTC AGGAGAGAAC
CCTCTGCGCG ACTGCATTAT CACAGAGGCC AGACGGTTGA GCCGTAACCG CCTACTTAAA
AGGTAA
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| Protein sequence | MKYSLKQITV FDAVASLESV SAAARKLSMT QSAVSMSLGQ LENLLGRPLF IRQGNRLTLS
HWGNWLRPKA RRLLQDAQHI ELGLHEQHLI SGRFRLCSSQ TAAEHLIPEL ISRIDTDFPE
LRIDLMVENT ENVIDGLLNY EFDLGIIEGR NDDSRLHQER WIDDHLVVFS SPHHPYAKYE
SASLSQLEQA KWVLREQGAG TRRIFEGAIH GIIEKLNVWK EYEQVSVLKS LVKNGQYISS
LPYLDVEKEV ANGELVILPT PQLNMQRHLS FIWRADSGEN PLRDCIITEA RRLSRNRLLK
R
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